Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769295.1_202014-10-10] 78 sequences; 43,168,069 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq33 174 2e-38 >seq33 Length=5643559 Score = 174 bits (192), Expect = 2e-38 Identities = 377/559 (67%), Gaps = 5/559 (1%) Strand=Plus/Minus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150 ||| ||||||||||| || | || ||||| || || || | ||| ||| ||| || || Sbjct 146635 GCAGGCAAAGTCGGTGTGAAGGCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAA 146576 Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210 ||| || | || || || ||||||||||| || || || ||||| ||| || || Sbjct 146575 ACCGGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAA 146516 Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCT 93270 ||||| || || || || || || || | ||||| |||||| | | | || | || Sbjct 146515 GATACCCTCGACAGCAGCGAAGGCAACCAGACGTTGGGCAAAGGTAGAGTCCTTG-TCCT 146457 Query 93271 G-ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGT 93329 | |||||| | ||||| || || || || || || || | || || | ||||| Sbjct 146456 GGATCCATCGAATGGCCCAGTCAGCCTTCTTTCGGATGCAGGGAATGGTATCAACAGCGT 146397 Query 93330 TAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACA 93389 | || ||||| ||||| | | | || ||||| || || || | ||| ||||| Sbjct 146396 TGAAGAGGTAGGTTCGCTGGGCAGGCTCCTTGATGTAGGTGTCAATGAGCAGGGAATAGG 146337 Query 93390 TTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGA 93449 | || || || | ||||||||| ||||||||||||||||| |||| ||| || | || Sbjct 146336 TCTCGGAGTGAATATTCTCCATCATGATTTGGAATCCGTAGAAGCATCGAGCCTCAGGGA 146277 Query 93450 TCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTG 93509 |||| || || |||| ||| ||||| || || ||||| || ||||| || || | Sbjct 146276 TCTGGACCTCGCCGCTGAATCGCTCAACGAGGTTCTCGTTGACAATGCCATCAGAAGCAG 146217 Query 93510 CaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCA-TCTT--TAAGCTTATCCC 93566 | || || || | || || || || | ||| ||| | | | | || | || Sbjct 146216 CGAAGAAGGCAAGGATGTGAGAGATGAAGAACTGCTCGTCAGTGGTCAGACGGTTGTTCC 146157 Query 93567 AATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTT 93626 ||||| ||||| || || ||||| | || ||| ||||||| || || || || || | Sbjct 146156 AATCGTGGAGATCCTTGGAGAGATCAATCTCCTCGGCAGTCCAGAAAGAAGCCTCGGCCT 146097 Query 93627 TTTTGTACATATCCCATAT 93645 | |||||||| | ||| || Sbjct 146096 TCTTGTACATTTGCCAGAT 146078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860257060720