Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769295.1_202014-10-10] 78 sequences; 43,168,069 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq73 356 4e-93 seq33 334 1e-86 >seq73 Length=2503951 Score = 356 bits (394), Expect = 4e-93 Identities = 1117/1710 (65%), Gaps = 59/1710 (3%) Strand=Plus/Plus Query 243741 TGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGTC 243800 ||||||||| || ||| |||| |||| || | |||||||||||||| |||||||| | Sbjct 1795465 TGAACTGGATAGGGGCGGCGGCAGCCTGTGTGCGAAGGTAGTACATGCCAGTCTTGAGAC 1795524 Query 243801 CACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCGT 243860 || |||| || || ||||||| || | ||| |||| || || || | Sbjct 1795525 CAAGCTTCCAGCCGGCGAAGTGCATGCTGGTGATCTTGCCCATCGTG------GGATCCT 1795578 Query 243861 CCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGG 243920 | | ||| | |||||||||||| ||| |||| ||| | | || || || | Sbjct 1795579 TCATGT---GAATG---TTGAGGGACTGGGACTGATCGATGAAAGCACCTCGGTCGGCAG 1795632 Query 243921 CCATGGTGATGAGGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGT 243980 |||| || | | |||||| ||||| | | |||||||| | | ||||| || Sbjct 1795633 CCATCTGGACAACCTGGCGCTGAGAAATCTCCCAAACAGTCTTGTAAAGAGCCTTGACGT 1795692 Query 243981 GCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGCA 244040 | |||| ||||||||| | || || || | | || | || | || Sbjct 1795693 CGGCAGGGATGTTGGGGATGTTCTGAATAGAACCGTTATCGGAAATAATACGGTTCTTCA 1795752 Query 244041 TGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGA----CCAGGTGCCTGTTCACC 244096 || ||| ||||| ||||| | | || ||| || ||||| | || || Sbjct 1795753 TGGCATCAGACCACAAGCCCATGTCGACAAGATCCTTGAGCAACCAGGGG----TTGACA 1795808 Query 244097 ACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATG 244156 ||||| ||||| || | || || ||||||||||| | |||| | || ||||||| | Sbjct 1795809 ACCTGGAACTCACCAGCAAGGACTCGGCGCTGGTAAATGTTGGAGGTGTAAGGCTCGAAG 1795868 Query 244157 CTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGA 244216 | ||| |||||||||| ||||||| || || ||||| ||||| || | | |||||| Sbjct 1795869 CACTCGTTGTTGCCCAGAATCTGCGAGGTACTGGCAGTAGGCATAGGGGCAAGGAGCAGA 1795928 Query 244217 CTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCT-GA--GCTCGTTCCAGTCCCACATG 244273 ||||| | | |||| ||| | | ||| || |||| | ||||||||| | | Sbjct 1795929 CTGTTACGGATACCGTTAGTCTTAA--CATCCTCTCGAAGGCTC-TCCCAGTCCCAAAGG 1795985 Query 244274 CCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACG 244333 | || ||| |||| | ||||||||| ||||| || | |||| | || Sbjct 1795986 TCGGA-AGGC--------TTGACGTTCCACATGTCGAACTGGAGGATACCCTCAGAGGCG 1796036 Query 244334 GGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTT-ACAGCTCTCGTC 244392 || |||| | |||| | ||||||||| || || ||||| || || | || Sbjct 1796037 GGAGAACCCTTGAAGGTAGAGTAGGGACCCTCCTCCTTGGCCAACTGCACGGAGGCAGT- 1796095 Query 244393 GAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCT-TGCCGC 244451 |||||| |||| |||||||||||| |||||| |||||| | || | |||| || | Sbjct 1796096 GAGGGCAGCGTGGTAGATGGTCTCAAAGATCTGCTTGTTGAGCTCTCTAGCCTCTGGAG- 1796154 Query 244452 AGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGA 244511 | |||||| |||| || | ||| | || || || ||||| || || | |||| Sbjct 1796155 ACTCGAAGGGCATGCGCAGAGCAAGGAAAGCATCAGCAAGACCCTGTACACCAAGACCGA 1796214 Query 244512 TGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGA 244571 | |||| ||| ||| ||||| | || || |||| ||||| |||| | |||| Sbjct 1796215 TAGGTCGGTGACGCATGTTGCTGTTGCGAGCCTCTTGCACAGGGTAGTGGTTGACATCGA 1796274 Query 244572 TCACCTTGTTGAGGTTGCGGGTGATCATGCGGAC-GACGTCGGCCAGCAGCTGAAAGTCG 244630 | | |||||| | ||||||| | || | ||| ||| | |||| || || || Sbjct 1796275 TGATCTTGTTCAAGTTGCGGACAA-CAACCTGACTGACCTGATGCAGCTTCTTGAAATCA 1796333 Query 244631 TACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCC 244690 || | | | || || | || ||| || | | ||||| | | ||| Sbjct 1796334 TA---GCAAGCCTCATCATAGTTGATGA-------AAGCAGGC--AGGGCAAGGGAGGCA 1796381 Query 244691 AGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTA 244750 |||||||| || || ||||| || | | ||||| || ||||| ||||| || ||| Sbjct 1796382 AGGTTGCAAACAGCGACCTCATCAGGGGCACAGTACTCGATGATCTCAGTGCACAGATTA 1796441 Query 244751 CTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAG 244810 || ||||||||| |||| || || ||| |||| ||| ||||| |||||||| Sbjct 1796442 GAGCTTCGGATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTACAGGCATCCTTGTAA 1796501 Query 244811 AGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTA 244870 ||||||||||| ||||||||| |||||| |||||| | | ||| || | | Sbjct 1796502 AGCATGAAGGGGTTTCCGGTCTCGGTCTGGGCCTCGAGGATGGCATACCAAAGCTTCTGG 1796561 Query 244871 GCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAAC 244930 ||||||| | | ||||| |||| || || |||||| ||| |||||||| ||| Sbjct 1796562 GCCTTGATGGACTTGCGACCCTTACCTTCCCTCTCGTACTTCTCGTAGAGGGCCTCAAAC 1796621 Query 244931 TCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCG 244990 || || || ||| | || || |||||| ||||||||||| ||||||| Sbjct 1796622 TCTTCACCGTAGCAGTCGGCAAGACCAGGGCACTCGTTGGGGCACATGAGGGTCCACTCT 1796681 Query 244991 CCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCC 245050 ||| | || || | || |||||| ||||| ||||||||||||||| |||| ||||| Sbjct 1796682 CCGTTCTTCTCAACACGCTTCATGAAAAGGTCAGGGATCCAGAGGGCCAGGAACAGGTCG 1796741 Query 245051 CTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCG 245110 | || | ||| ||| || |||||| | || || | || |||||||| || Sbjct 1796742 CGGGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAACTCAAAGACATCA 1796801 Query 245111 ACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCC 245170 ||||||| ||||| | ||||| ||| | || || || |||||||| || ||||| || Sbjct 1796802 GCGTGCCAAGGCTCAAGGTAGATAGCAAAAGCACCAGGTCGCTTGTTACCACCCTGATCA 1796861 Query 245171 ACCATCCTCTCGAGCG-CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCC 245229 || | | || | |||||||| || || |||| || | ||||| || || Sbjct 1796862 ACGTAGCGGGC-AGTGTTGTTGAAGACACGTAGCATAGGAACAACACCGTTGGATGTACC 1796920 Query 245230 GTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGA--GGTTGCTGATGGACATGCCTAGT 245287 |||||| || ||||||| ||| || | | || | || || || | || | Sbjct 1796921 GTTGGTACCAGCAATGTAGGAGCCAGTGGCACGGATTCGGTGGGCATTGAGA--CCAATA 1796978 Query 245288 CCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATG 245347 || || || |||||| || | ||| ||| |||||| ||| || || || || ||| Sbjct 1796979 CCACCAGCCATCTTGGAAATCATGGCACAGGTCTTGAGGGTATCATAGATACCGTCAATG 1797038 Query 245348 CTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAG 245407 |||||| |||||| | | || ||||| ||||| |||||||| | ||| | | | | Sbjct 1797039 CTGTCCTCCTTCATATCAACCAAGAAGCATGAGGAAAGCTGGGGTTGAGGGGTACCAGCG 1797098 Query 245408 TTGAACAGAGTGGGGCTGGCGTGGGTAAAG 245437 ||||| || |||||| || ||||| ||| Sbjct 1797099 TTGAAGAGGGTGGGGGAAGCATGGGTGAAG 1797128 >seq33 Length=5643559 Score = 334 bits (370), Expect = 1e-86 Identities = 599/862 (69%), Gaps = 32/862 (4%) Strand=Plus/Plus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| |||||||||||||| || || |||||| |||||||||||||| || Sbjct 146078 ATCTGGCAAATGTACAAGAAGGCCGAGGCTTCTTTCTGGACTGCCGAGGAGATTGATCTC 146137 Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGAAC----GAAAAGTTTTTCCTCAA 42415 ||||||| | | | | ||| || |||||| || || |||| ||| || Sbjct 146138 TCCAAGGAT-CTCCACGATTGGAACAACCGTCTGACCACTGACGAGCAGTTCTTCATCTC 146196 Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475 |||| || ||||||||||| || ||||| ||||| ||||| |||||||| | | Sbjct 146197 TCACATCCTTGCCTTCTTCGCTGCTTCTGATGGCATTGTCAACGAGAACCTCGTTGAGCG 146256 Query 42476 GTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535 |||| ||||| ||| | |||||| || ||||||||||| ||||| || || Sbjct 146257 ATTCAGCGGCGAGGTCCAGATCCCTGAGGCTCGATGCTTCTACGGATTCCAAATCATGAT 146316 Query 42536 AGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATCC 42592 ||||| | ||||| ||| || || ||||||| |||| |||||| ||| || Sbjct 146317 GGAGAATATTCACTCCGAGACCTATTCC---CTGCTCATTGACACCTACATCAAGGAGCC 146373 Query 42593 CGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGC 42652 | | |||| | | || ||||| || | || || || ||||||||| |||||||| Sbjct 146374 TGCCCAGCGAACCTACCTCTTCAACGCTGTTGATACCATTCCCTGCATCCGAAAGAAGGC 146433 Query 42653 GGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGC 42712 |||||||| | |||||| || ||| | || || | | | | ||||| || Sbjct 146434 TGACTGGGCCATTCGATGGATCCAGGACAAGGACTCTACCTTTGCCCAACGTCTGGTTGC 146493 Query 42713 CTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAA 42772 ||| | || |||||||| ||||||||| || ||||| |||||||||||||||||||| Sbjct 146494 CTTCGCTGCTGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCTGGCTCAA 146553 Query 42773 GCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGG 42831 | || || || |||||||| | |||||||| ||||| |||||| | ||||||| Sbjct 146554 GAAGCGTGGCCTC-ATGCCCGGTTTGACCTTCTCCAACGAGCTCATCTCTCGTGACGAGG 146612 Query 42832 GGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTC-AGGCACAAGCCCTCG 42890 | || || | |||||||||||||| || ||| ||| ||| ||| | || | Sbjct 146613 GCCTTCACACCGACTTTGCCTGCCTTCTTCACTC---CCATCTCAAGGGCCGTGCTAGC- 146668 Query 42891 AAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACG 42950 ||| || | ||| || |||||| || ||||| || ||| ||||||||||||| Sbjct 146669 AAGCAGATGATCCAGGACATCATTTGTGATGCCGTCACCATTGAGCAGGAGTTCCTCACT 146728 Query 42951 CAGTCGCTGCCC-GTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCA 43009 || | || ||| ||| ||||| | ||||||||| | |||| ||| ||||||| | Sbjct 146729 GAGGCTCTCCCCTGTG-CCCTGCTTGGCATGAACTCCAACCTGATGAAGCAGTACATTGA 146787 Query 43010 GTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGC--CG----CCTCTACAACAC 43063 || ||||| |||| ||| || | | |||| || || | ||||| | Sbjct 146788 GTTTGTCGCTGACCGTCTACT------CGTCGCTCTCGGCAACGAGAAGGTTTACAAGGC 146841 Query 43064 GCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGA 43123 | |||||||||||| |||||||||||||| | | |||||||||||||| ||||| Sbjct 146842 CACAAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGTGGCAAGACCAACTTCTTCGA 146901 Query 43124 GAAGCGCGTCGCCGACTACCAG 43145 |||||| ||||| ||||||||| Sbjct 146902 GAAGCGTGTCGCTGACTACCAG 146923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944338279269280