Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769295.1_202014-10-10] 78 sequences; 43,168,069 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq33 104 5e-17 seq12 89.7 1e-12 >seq33 Length=5643559 Score = 104 bits (114), Expect = 5e-17 Identities = 126/172 (73%), Gaps = 0/172 (0%) Strand=Plus/Plus Query 243566 TTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCA 243625 ||||||||||||| | || ||| |||||||| || || || || ||||| | || Sbjct 146751 TTGGCATGAACTCCAACCTGATGAAGCAGTACATTGAGTTTGTCGCTGACCGTCTACTCG 146810 Query 243626 TCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCA 243685 |||| || || | ||||| || ||||| ||| |||||||| | ||| |||||| || Sbjct 146811 TCGCTCTCGGCAACGAGAAGGTTTACAAGGCCACAAACCCCTTCGACTTCATGGAGAACA 146870 Query 243686 TTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA 243737 | || ||| || || || ||||||||||| ||||||||| ||| || || Sbjct 146871 TCTCCCTTGGTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGCTGACTACCA 146922 >seq12 Length=4746347 Score = 89.7 bits (98), Expect = 1e-12 Identities = 124/174 (71%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 334181 GGGGAACCCTTCAAGCTGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCC 334240 |||||| || |||| ||| |||| || |||||||| ||||| || || || | || Sbjct 1940297 GGGGAAACCCTCAACCTGCTCGTTGTTGATGGCGCGCATAAGAGTGGACTTTCCGGAACC 1940356 Query 334241 GTTTGGCCCACACAGACCGTAGCGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAG 334300 ||| || || || |||||||| || | |||||||| || || | || | ||| || Sbjct 1940357 GTTGGGACCGCAAAGACCGTAACGCTGACCACGCTTGAGGCGGAGATGGGTCTGGTTGAG 1940416 Query 334301 AAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 334354 |||||| || |||| || || ||||| || ||| | || ||||||||||| Sbjct 1940417 AAGAATCTTGGCACCGTAGGCAAGAGAGAAGGTACAGTTGCAAAGATCCTCACC 1940470 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102878897809300