Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769295.1_202014-10-10] 78 sequences; 43,168,069 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq73 219 5e-52 seq33 134 2e-26 >seq73 Length=2503951 Score = 219 bits (242), Expect = 5e-52 Identities = 963/1508 (64%), Gaps = 51/1508 (3%) Strand=Plus/Plus Query 113903 TTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGC 113962 |||||||| |||||||| || ||| || | | | || || |||| ||||| ||| Sbjct 1795803 TTGACAACCTGGAACTCACCAGCAAGGACTCGGCGCTGGTAAATGTTGGAGGTGTAAGGC 1795862 Query 113963 TCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATG 114022 || |||||||| ||||| |||| || || | ||| ||| || ||||| || || | | Sbjct 1795863 TCGAAGCACTCGTTGTTGCCCAGAATCTGCGAGGTACTGGCAGTAGGCATAGGGGCAAGG 1795922 Query 114023 AGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTC-CTTGAGGGCG-TCCCAGTCGT 114080 || || |||||||||| ||| || | ||| | | | || || ||| |||||||| Sbjct 1795923 AGCAGACTGTTACGGATACCGTTAGTCTTAA--CATCCTCTCGAAGGCTCTCCCAGTCCC 1795980 Query 114081 AGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCG 114140 | | | || | | |||||| || |||||||||||||| | ||||| || | Sbjct 1795981 AAAGGTCGGAAGGCTTGACGTTCCACATGTCGAACTGGAGGATACCCTCAGAGGCGGGAG 1796040 Query 114141 ATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATT---CGGAGCTCGCCTCGA 114197 | |||| || || ||| || ||||| ||| ||||| | ||||| || || Sbjct 1796041 AACCCTTGAAGGTAGAGTAGGGACCCTCCTCCTTGGCCAACTGCACGGAG---GCAGTGA 1796097 Query 114198 GGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAAT 114257 |||| ||||| || || |||||||| || | || | | | ||||| || | Sbjct 1796098 GGGCAGCGTGGTAGATGGTCTCAAAGATCTGCTTGTTGAGCTCTCTAGCCTCTGGAGACT 1796157 Query 114258 CAAACGCGAGTCGGCACAA-AATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATT 114316 | || | | || || | || || |||| || ||||| || ||||| || || || Sbjct 1796158 CGAAGGGCATGCG-CAGAGCAAGGAAAGCATCAGCAAGACCCTGTACACCAAGACCGATA 1796216 Query 114317 GGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATA 114376 || || || | ||| || || ||||| | ||| || || || |||||| Sbjct 1796217 GGTCGGTGACGCATGTTGCTGTTGCGAGCCTCTTGCACAGGGTAGTGGTTGACATCGATG 1796276 Query 114377 ACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAA 114436 | | | || | || | ||||||| ||| | ||| ||||| | | ||||| | Sbjct 1796277 ATCTTGTTCAAGTTGCGGACAACAACCTGACTGACCTGATGCAGCTTCTTGAAATCATA- 1796335 Query 114437 CTGCGAGTCTCTTCAT---TGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACA 114493 || || ||| |||| ||| | ||| ||||| | || || || || || ||| Sbjct 1796336 --GCAAGCCTCATCATAGTTGATGAAAGCAGGCAGGGCAAGGGAGGCAAGGTTGCAAACA 1796393 Query 114494 GAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATG 114553 | | |||||| || |||||| || || || || |||| ||| || || ||| Sbjct 1796394 GCGACCTCATCAGGGGCACAGTACTCGATGATCTCAGTGCACAGATTAGAGCTTCGGATG 1796453 Query 114554 GTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGC 114613 ||||| | |||||| || || ||| |||||| |||||||||||||||||| | || Sbjct 1796454 GTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTACAGGCATCCTTGTAAAGCATGAAGGGG 1796513 Query 114614 GTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGT 114672 | || ||||| || |||| || ||| || || | ||| | | || | | || | | Sbjct 1796514 TTTCCGGTCTCGGTCTGGGCCTCGAGGATGGCATACCAAAGCTTCTGGGCCTTG----AT 1796569 Query 114673 GGCGTTGGCTCGC---CCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACC 114729 || ||| | | || ||| ||||||||| ||||||||| |||||||||||||| Sbjct 1796570 GGACTTGCGACCCTTACCTTCCCTCTCGTACTTCTCGTAGAGGGCCTCAAACTCTTCACC 1796629 Query 114730 CACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTC 114789 | || | || || || || | ||||| | ||| | ||| | || || Sbjct 1796630 GTAGCAGTCGGCAAGACCAGGGCACTCGTTGGGGCACATGAGGGTCCACTCTCCGTTCTT 1796689 Query 114790 CTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCG 114849 |||||||||||||||||| ||||| ||||||||||| || ||| || || || ||| Sbjct 1796690 CTCAACACGCTTCATGAAAAGGTCAGGGATCCAGAGGGCCAGGAACAGGTCGCGGGCGCG 1796749 Query 114850 AGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCA 114909 | || || | || || || || | || | || || | || ||| |||||||| Sbjct 1796750 GACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAACTCAAAGACATCAGCGTGCCA 1796809 Query 114910 CGGTTCCAGGTACACCGCGATTGACCCCTTACGACG------ACCAGCCTGGTTTACATA 114963 || || ||||| | || | | || | | || |||| |||| | || || Sbjct 1796810 AGGCTCAAGGTAGATAGCAAAAGCACC---AGGTCGCTTGTTACCACCCTGATCAACGTA 1796866 Query 114964 CCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGT 115023 | || ||| || || || || ||||| |||| | ||| | ||| || || || Sbjct 1796867 GCGGGCAGTGTTGTTGAAGACACGTAGCATAGGAACAACACCGTTGGATGTACCGTTGGT 1796926 Query 115024 CCCCCGAA--TACGAGACTTATTGGCTCTGACATCATGGATGTGCAT----ACCAATACC 115077 || || || ||| | | |||| | || | | || |||| ||||||||| Sbjct 1796927 ACCAGCAATGTAGGAGCC--AGTGGCACGGA----TTCGGTGGGCATTGAGACCAATACC 1796980 Query 115078 CCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGA 115137 || ||| ||| || || || || | |||| | | ||||| ||||| || Sbjct 1796981 ACCAGCCATCTTGGAAATCATGGCACAGGTCTTGAGGGTATCATAGATACCGTCAATGCT 1797040 Query 115138 GTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTT 115197 ||| |||| | | | | |||||| || | || || || ||||||||||| Sbjct 1797041 GTCCTCCTTCATATCAACCAAGAAGCATGAGGAAAGCTGGGGTTGAGGGGTACCAGCGTT 1797100 Query 115198 GAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTG--GGACATCTTATCGTAGGTCTCC 115255 ||||||||| || | || ||| ||| | | |||| |||||| | ||| |||||| Sbjct 1797101 GAAGAGGGTGGGGGAAGCATGGGTGA--AGAACTTGCTGGACATAAGGTTGTATGTCTCC 1797158 Query 115256 AAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGG 115315 ||||| ||| || || || ||||| || || || ||||| | ||||| || Sbjct 1797159 AAGACACGCTCAATATCATCACCCCATATACCAATAGACACACGCATGATCATGTGCTGA 1797218 Query 115316 GGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGA 115375 || ||| | | | || || | | | ||||||| |||||| ||||||| Sbjct 1797219 GGACGTTCGACAATCTTGCCGTCAATCTTGAGGAGGTATGATCGCTCCAACGTCTTGAAG 1797278 Query 115376 CCAAAATA 115383 ||||| || Sbjct 1797279 CCAAAGTA 1797286 >seq33 Length=5643559 Score = 134 bits (148), Expect = 2e-26 Identities = 527/815 (65%), Gaps = 19/815 (2%) Strand=Plus/Minus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817 |||||| | || ||||||||||||||||| ||||| || | | | ||| |||||||| Sbjct 146920 GTAGTCAGCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGGGAGATGTTCTCCAT 146861 Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAA--TTGTTGGCACCCCAATCTGTTTGAGGAGA 125875 || || || ||||| | | || ||| || | | || | | ||| ||| Sbjct 146860 GAAGTCGAAGGGGTTTGTGGCCTTGTAAACCTTCTCGTTGCCGAGAGCGAC--GAGTAGA 146803 Query 125876 CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTA 125935 || || | ||| |||||||||||| |||| | |||||||| || | ||| | Sbjct 146802 CGGTCAGCGACAAACTCAATGTACTGCTTCATCAGGTTGGAGTTCATGCCAAGCAGGGCA 146743 Query 125936 CATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGCG 125995 || ||||| || || || |||| ||| |||||| ||||| || | | |||| | Sbjct 146742 CAGGGGAGAGCCTCAGTGAGGAACTCCTGCTCAATGGTGACGGCATCACAAATGATGTCC 146683 Query 125996 TGAATGGTGTCCACCCCAG---GTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAAC 126052 || || | | | | || | | ||| | | | |||||| | |||||| Sbjct 146682 TGGATCATCTGCTTGCTAGCACGGCCCTTGAG-ATGGGAGTGAAGAAGGCA--GGCAAAG 146626 Query 126053 TCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATG 126112 || ||| || ||||||||||| |||||||| || || |||||| || || |||||| Sbjct 146625 TCGGTGTGAAGGCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAAACCGGGCATG 146566 Query 126113 AGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCC 126172 || || |||||||| | |||||| || | ||| | ||| ||||||||| ||||| Sbjct 146565 AGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGATACCCTCG 146506 Query 126173 ACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGT-GTCAAACCACTT 126231 ||| ||||| |||| ||||| | ||||||| | | | |||| | | ||| Sbjct 146505 ACAGCAGCGAAGGCAACCAGACGTTGGGCAAAGG-TAGAGTCCTTGTCCTGGATCCATCG 146447 Query 126232 CATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTC 126291 || ||||| | ||||| || ||| || || | ||| | | || | ||||| | Sbjct 146446 AATGGCCCAGTCAGCCTTCTTTCGGATGCAGGGAATGGTATCAACAGCGTTGAAGAGGTA 146387 Query 126292 CTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTG 126351 | | | || || |||||||| | || ||||| ||||| || ||| ||| Sbjct 146386 GGTTCGCTGGGCAGGCTCCTTGATGTAGGTGTCAATGAGCAGGGAATAGGTCTCGGAGTG 146327 Query 126352 GACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCT 126410 | | | ||| || | || | ||||||| | || || || ||||| |||| Sbjct 146326 AATATTCTCCATCAT-GATTTGGAATCCGTAGAAGCATCGAGCCTCAGGGATCTGGACCT 146268 Query 126411 CATCGGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAAC 126469 | | || ||| | | | || ||||| ||||| ||||| || |||| || || Sbjct 146267 C-GCCGCTGAATCGCTCAACGAGGTTCTCGTTGACAATGCCATCAGAAGCAGCGAAGAAG 146209 Query 126470 GCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCA 126526 || ||||| | ||||| ||| || | | ||| || | ||||| |||| Sbjct 146208 GCAAGGATGTGAGAGATGAAGAACTGCTCGTCAGTGGTCAGACGGTTGTTCCAATCGTGG 146149 Query 126527 AGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561 |||||||| |||||||| | |||||| |||||||| Sbjct 146148 AGATCCTTGGAGAGATCAATCTCCTCGGCAGTCCA 146114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353017580240