Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769295.1_202014-10-10] 78 sequences; 43,168,069 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq73 241 1e-58 >seq73 Length=2503951 Score = 241 bits (266), Expect = 1e-58 Identities = 1059/1664 (64%), Gaps = 28/1664 (2%) Strand=Plus/Minus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||| | ||||||| |||||| || ||||| || |||||||||||||| || |||| | Sbjct 1797292 TACCAATACTTTGGCTTCAAGACGTTGGAGCGATCATACCTCCTCAAGATTGACGGCAAG 1797233 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 || ||| || || || || || | ||||| || | || || || || | || Sbjct 1797232 ATTGTCGAACGTCCTCAGCACATGATCATGCGTGTGTCTATTGGTATATGGGGTGATGAT 1797173 Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCCACC 93897 || | ||| ||| | | | || ||| |||| | ||| || || Sbjct 1797172 ATTGAGCGTGTCTTGGAGACATACAACCTTATGTCCAGCAAGTTCTTCACCCATGCTTCC 1797113 Query 93898 CCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACG 93957 || ||||| |||||||| || ||||| || ||| | || || || ||| || | Sbjct 1797112 CCCACCCTCTTCAACGCTGGTACCCCTCAACCCCAGCTTTCCTCATGCTTCTTGGTTGAT 1797053 Query 93958 AACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCA 94017 | |||| ||| ||| ||| || | || | ||||||| |||||| | || || Sbjct 1797052 ATGAAGGAGGACAGCATTGACGGTATCTATGATACCCTCAAGACCTGTGCCATGATTTCC 1796993 Query 94018 AAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATC 94077 || || || || || || ||| || |||| | ||||||| || |||||||| Sbjct 1796992 AAGATGGCTGGTGGTATTGGTCTCAATGCCCACCGAATCCGTGCCACTGGCTCCTACATT 1796933 Query 94078 CGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCG 94137 |||||||| || || |||||||| | || |||||||| || |||||||||||| | Sbjct 1796932 GCTGGTACCAACGGTACATCCAACGGTGTTGTTCCTATGCTACGTGTCTTCAACAACACT 1796873 Query 94138 GCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAG 94197 || |||||||| || ||||||||| | | | ||| |||| || |||| || ||| Sbjct 1796872 GCCCGCTACGTTGATCAGGGTGGTAACAAGCGACCTGGTGCTTTTGCTATCTACCTTGAG 1796813 Query 94198 CCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTG 94257 || |||||||| || || | ||| | || || |||||||||||||| || || | Sbjct 1796812 CCTTGGCACGCTGATGTCTTTGAGTTCCTTGATCTCCGAAAGAACCACGGTAAGGAGGAG 1796753 Query 94258 GAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTC 94317 | | ||| | ||||| ||| || |||||| | || |||||||| ||||| || || Sbjct 1796752 GTCCGCGCCCGCGACCTGTTCCTGGCCCTCTGGATCCCTGACCTTTTCATGAAGCGTGTT 1796693 Query 94318 GAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGAC-GT 94376 ||||| ||| | |||| || | || ||||| || || || || || ||||| | Sbjct 1796692 GAGAAGAACGGAGAGTGGACCCTCATGTGCCCCAACGAGTGCCCTGGTCTTGCCGACTGC 1796633 Query 94377 T--TGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAGG 94434 | ||| | | ||||| | | | || | ||||| | | || |||| | Sbjct 1796632 TACGGTGAAGAG---TTTGAGGCCCTCTACGAGAAGTACGAGAGGGAAGGTAAGGGTCGC 1796576 Query 94435 AAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGT 94494 ||| || | || |||||| ||| || ||| | || | ||| ||||| || Sbjct 1796575 AAGTCCATCAAGGCCCAGAAGCTTTGGTATGCCATCCTCGAGGCCCAGACCGAGACCGGA 1796516 Query 94495 ACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGG 94553 | |||| ||| | | |||||| |||| ||| |||| ||||||| || ||||||| Sbjct 1796515 AACCCCTTCATGCTTTACAAGGATGCCTGT-AACCGCAAGAGCAACCAGAAGAACCTCGG 1796457 Query 94554 GGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGAT 94613 ||| ||||| ||||||||||| ||||| ||||||| | | || || ||| | Sbjct 1796456 CACCATCCGAAGCTCTAATCTGTGCACTGAGATCATCGAGTACTGTGCCCCTGATGAGGT 1796397 Query 94614 TGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACACGTC 94673 ||||| || ||||| | |||| | |||| | ||||| | | || Sbjct 1796396 CGCTGTTTGCAACCTTGCCTCCCTTGCCCTGCCTGCTTTCAT---------CAACTATGA 1796346 Query 94674 TACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATG--GTCTTGAAC 94731 | |||| | ||| | || |||| | | | | ||| || ||| ||| Sbjct 1796345 TGAGGCTTGCTATGATTTCAAGAAGCT--GCATCAGGTCAGTCAGGTTGTTGTCCGCAAC 1796288 Query 94732 CTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTG 94791 |||||| | | ||||| ||| |||||| || | ||||| ||| ||| || Sbjct 1796287 TTGAACAAGATCATCGATGTCAACCACTACCCTGTGCAAGAGGCTCGCAACAGCAACATG 1796228 Query 94792 AAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGCGT 94851 || || || ||||| | || || |||||| | || || || | | |||| Sbjct 1796227 CGTCACCGACCTATCGGTCTTGGTGTACAGGGTCTTGCTGATGCTTTCCTTGCTCTGCGC 1796168 Query 94852 CTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATTTAT 94911 |||||| ||| ||| || || | | || | | || || || | ||| || Sbjct 1796167 ATGCCCTTCGAGTCTCCAGAGGCTAGAGAGCTCAACAAGCAGATCTTTGAGACCATCTAC 1796108 Query 94912 TACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACGAATCG 94971 ||| ||| | | ||||| || ||||||| ||| | || || || | Sbjct 1796107 CACGCTGCCCTCACTGCCTCCGTGCAGTTGGCCA---AGGAGGAGGGTCCCTACTCTACC 1796051 Query 94972 TTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCCC 95031 ||| || || ||| |||| || | ||||||||| | ||| || ||||| Sbjct 1796050 TTCAAGGGTTCTCCCGCCTCTGAGGGTATCCTCCAGTTCGACATGTGGAACGTCAAGCCT 1795991 Query 95032 TCGGGTCTGTACGACTGGGA-AGCTCTACGCGCTGATGTTATCAAACACGGTGTGAAAAA 95090 || | || | |||||||| ||| || || | ||||||| | ||||| | || Sbjct 1795990 TCCGACCTTTGGGACTGGGAGAGC-CTTCGAGAGGATGTTAAGACTAACGGTATCCGTAA 1795932 Query 95091 CGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGA 95150 | ||||| | ||||| ||||| || ||| || ||||||| || ||||||||||| Sbjct 1795931 CAGTCTGCTCCTTGCCCCTATGCCTACTGCCAGTACCTCGCAGATTCTGGGCAACAACGA 1795872 Query 95151 GTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCC 95210 || ||||| || | |||||||||| | ||| | | || || || || || || |||| Sbjct 1795871 GTGCTTCGAGCCTTACACCTCCAACATTTACCAGCGCCGAGTCCTTGCTGGTGAGTTCCA 1795812 Query 95211 CGTCATCAACAAGCACCTCCT-ACGGGACCTGACGTCTCTGGGTGTGTGGGGTGACAAGG 95269 || ||||| | || | || | || || | |||| ||||| ||| Sbjct 1795811 GGTTGTCAACCCCTGGTTGCTCAAGGATCTTGTCGAC-ATGGGCTTGTGGTCTGATGCCA 1795753 Query 95270 TCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAATACCGGAGG 95329 | ||||||| | | || ||||| || | ||||||||||| | || || | | Sbjct 1795752 TGAAGAACCGTATTATTTCCGATAACGGTTCTATTCAGAACATCCCCAACATCCCTGCCG 1795693 Query 95330 ACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGC 95373 || ||||||| || |||||||| || |||||||| | |||||| Sbjct 1795692 ACGTCAAGGCTCTTTACAAGACTGTTTGGGAGATTTCTCAGCGC 1795649 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722717644880