Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769295.1_202014-10-10] 78 sequences; 43,168,069 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq73 262 5e-65 seq22 116 4e-21 seq3 109 6e-19 >seq73 Length=2503951 Score = 262 bits (290), Expect = 5e-65 Identities = 1182/1851 (64%), Gaps = 59/1851 (3%) Strand=Plus/Plus Query 109399 GCCTTCGAGCGAAGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGC 109458 |||| | |||||| || ||||| || || ||||||||| |||||| || | ||| Sbjct 1795488 GCCTGTGTGCGAAGGTAGTACATGCCAGTCTTGAGACCAAGCTTCCAGCCGGCGAAGTGC 1795547 Query 109459 ATTGAAGAGAGTTTGGAAAGTGTCGGACTCTCCATAAACAAGTTCATCGACTGAGACTGA 109518 || | || ||| | || ||| || ||| | ||| | ||||| |||||| Sbjct 1795548 ATGCTGGTGATCTTGCCCATCGTGGGATCCTTCATGTGAATGTTGAGGGACTGGGACTGA 1795607 Query 109519 TCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACACTTTTGGCT----AATTTC 109574 |||||||| ||| || || || ||||| | || | | | ||| ||| || Sbjct 1795608 TCGATGAAAGCACCTCGGTCGGCAGCCATCTGGACAA----CCTGGCGCTGAGAAATCTC 1795663 Query 109575 CCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGA 109634 ||| ||||||||||| | | ||||| || | || |||| |||||| |||||||| Sbjct 1795664 CCAAACAGTCTTGTAAAGAGCCTTGACGTCGGCAGGGATGTTGGGGATGTTCTGAATAGA 1795723 Query 109635 GCCACCAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAGACCGACCTTTTTGAG 109694 || | | | || | | |||||| | | ||||| | || | | || Sbjct 1795724 ACCGTTATCGGAAATAATACGGTTCTTCATGGCATCAGACCACAAGCCCATGTCGACAAG 1795783 Query 109695 ATCGT----CAACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGA 109750 ||| | |||| || | ||||| || || ||||||||||| || || Sbjct 1795784 ATCCTTGAGCAACCAGGGG----TTGACAACCTGGAACTCACCAGCAAGGACTCGGCGCT 1795839 Query 109751 GGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGG 109810 |||| ||||| | ||||| || ||||| ||||| |||||||| || || || | || Sbjct 1795840 GGTAAATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGCGAGGTAC 1795899 Query 109811 AAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGCT 109870 || || ||||| || || | ||| |||||||| |||| ||| || ||||| || || Sbjct 1795900 TGGCAGTAGGCATAGGGGCAAGGAGCAGACTGTTACGGATACCGTTAGTCTTAACATCCT 1795959 Query 109871 CACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCATCCCACATATCTG 109930 | || | ||||| || || | | | | || | | |||||| || Sbjct 1795960 CTCGAAGGCTCTCCCAGTCCCAAAGGTCGGAA------GGCTTGACGTTCCACATGTCGA 1796013 Query 109931 GTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCT 109990 || || | |||||||| || |||||||||||||| | ||| | ||||| ||| Sbjct 1796014 ACTGGAGGATACCCTCAGAGGCGGGAGAACCCTTGAAGGTAGAGTAGGGACCCTCCTCCT 1796073 Query 109991 CGGCCAACTCGGATGAAGCCTCT-AGTGCCGCATGATACATAGTCTCAAAAATATGAGCA 110049 |||||||| | | | || | | || || || || || || |||||||| || || Sbjct 1796074 TGGCCAACT-GCACGGAGGCAGTGAGGGCAGCGTGGTAGATGGTCTCAAAGATCTGC--- 1796129 Query 110050 TTCATGAGG---CGAGACTCTTCACAGTCGAAGGGAAGACCACAAAG-AATAAACACATC 110105 || |||| | || |||| | | |||||||| | | || || || || |||| Sbjct 1796130 TTGTTGAGCTCTCTAGCCTCTGGAGACTCGAAGGGCATGCG-CAGAGCAAGGAAAGCATC 1796188 Query 110106 CGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGT 110165 || |||||||| ||||| ||||| || || || || |||||| | ||||| Sbjct 1796189 AGCAAGACCCTGTACACCAAGACCGATAGGTCGGTGACGCATGTTGCTGTTGCGAGCCTC 1796248 Query 110166 TTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGT 110225 || || ||||| |||| ||||||| | || | || ||| || | Sbjct 1796249 TTGCACAGGGTAGTGGTTGACATCGATGATCTTGTTCAAGTTGCGGACAACAACCTGACT 1796308 Query 110226 GATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTA-TTGACATATTTGGGGA 110284 || | ||| || || | | |||| | | | || | || |||| | || | Sbjct 1796309 GACCTGATGCAGCTTCTTGAAATCATA-GCAAGCCTCATCATAGTTGATGAAAGCAGGCA 1796367 Query 110285 GAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTT 110344 | |||| || ||||| ||||| |||| ||| || | | ||| || | || | Sbjct 1796368 GGGCAAGGGAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGCACAGTACTCGATGATCT 1796427 Query 110345 CCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGC 110404 | || |||| || || || ||| || | ||||||||| || ||| ||| | Sbjct 1796428 CAGTGCACAGATTAGAGCTTCGGATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTAC 1796487 Query 110405 ATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCT 110464 | |||||||| || |||||| | ||| | || || || ||||| | || ||| ||||| | Sbjct 1796488 AGGCATCCTTGTAAAGCATGAAGGGGTTTCCGGTCTCGGTCTGGGCCTCGAGGATGGCAT 1796547 Query 110465 TCCATA-CATCGGCGGCGGGGACAG--TTGCGTTAGCGAGACCTTCCTCCTCGTACTTGG 110521 ||| | | || | ||| || | ||||| | | ||||||| ||||||||| Sbjct 1796548 ACCAAAGCTTCTG-GGCCTTGATGGACTTGCG--ACCCTTACCTTCCCTCTCGTACTTCT 1796604 Query 110522 TGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGAC 110581 ||| | | ||||||| || | ||||| || | |||||| || || ||| | Sbjct 1796605 CGTAGAGGGCCTCAAACTCTTCACCGTAGCAGTCGGCAAGACCAGGGCACTCGTTGGGGC 1796664 Query 110582 AGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACA 110641 | | ||||| ||| | ||| || |||||| | ||||||||| |||||||| ||||| | Sbjct 1796665 ACATGAGGGTCCACTCTCCGTTCTTCTCAACACGCTTCATGAAAAGGTCAGGGATCCAGA 1796724 Query 110642 TCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCA 110701 ||| ||| ||||| ||| || |||| || | ||| ||||| || || || | Sbjct 1796725 GGGCCAGGAACAGGTCGCGGGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAA 1796784 Query 110702 AAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACGAC 110761 || || | || ||| | |||||| || || || |||| ||| | | || | | | Sbjct 1796785 GGAACTCAAAGACATCAGCGTGCCAAGGCTCAAGGTAGATAGCAAAAGCACC---AGGTC 1796841 Query 110762 G------ACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAA 110815 | ||| |||| | ||| ||||| || ||| |||||||| | |||||||||| Sbjct 1796842 GCTTGTTACCACCCTGATCAACGTAGCGGGCAGTGTTGTTGAAGACACGTAGCATAGGAA 1796901 Query 110816 TAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGT 110875 || || | |||| ||| || ||||| ||| ||| | ||||||| || || Sbjct 1796902 CAACACCGTTGGATGTACCGTTGGTACCAGCAATGTAGGAGCCAGTGGCACGGATTCGGT 1796961 Query 110876 GGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACA-CTCTGTGAGTGTA 110934 || || | |||||||||||| ||| ||| ||| ||||| ||| |||| ||| Sbjct 1796962 GGGCATTGAGACCAATACCACCAGCCATCTTGGAAATCATGGCACAGGTCT-TGAGGGTA 1797020 Query 110935 CCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGA 110994 |||| ||||| ||||| || |||| | ||| | ||||| || || | ||| Sbjct 1797021 TCATAGATACCGTCAATGCTGTCCTCCTTCATATCAACCAAGAAGCATGAGGAAAGCTGG 1797080 Query 110995 GGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTG--GG 111052 || |||| || || || |||||||| || || | ||||| ||| ||| |||| || Sbjct 1797081 GGTTGAGGGGTACCAGCGTTGAAGAGGGTGGGGGAAGCATGGGTGA--AGAACTTGCTGG 1797138 Query 111053 ACATCTTGTTGTATGTGTCGAGTGCGGAGGGT--ACATCTTTACCGTGAATACCAATGGC 111110 |||| ||||||||| || | | | | | | ||| | ||| |||||||| | Sbjct 1797139 ACATAAGGTTGTATGTCTCCAAGAC--ACGCTCAATATCATCACCCCATATACCAATAGA 1797196 Query 111111 AACTCGCATGAACATATATTGAGGCGTTTCGATTAGCTTTCCATCAACACGCTGAAGGTA 111170 || ||||||| ||| | ||||| ||||| | ||| || |||| | ||||| Sbjct 1797197 CACACGCATGATCATGTGCTGAGGACGTTCGACAATCTTGCCGTCAATCTTGAGGAGGTA 1797256 Query 111171 ACTCTTCTCTAGGGTCTTGAGACCAAAGTATCCAAAATCGAAATCACGATC 111221 ||| | ||||||| ||||||||| | | ||||||||| || Sbjct 1797257 TGATCGCTCCAACGTCTTGAAGCCAAAGTATTGGTATTGGAAATCACGGTC 1797307 >seq22 Length=6460479 Score = 116 bits (128), Expect = 4e-21 Identities = 188/264 (71%), Gaps = 6/264 (2%) Strand=Plus/Minus Query 11737 AAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGCA 11796 || |||||||| || ||||| ||||||||||| ||||| ||||| | || || | || Sbjct 1335661 AAGAGTTCACGGACTCGCTTGGCTCCAACACCAACGAAGATCTCGTCAAA-TTCACTGCC 1335603 Query 11797 GAACACTGA-ATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTT 11855 | ||| | | ||| |||||| || |||||||| | |||||||||||||| ||||| Sbjct 1335602 GGACATGTAGAAGAACGGAACACCAGCTTCACCAGCAACAGCTCGAGCGAGGAGCGTCTT 1335543 Query 11856 ACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC-ACTTC-CA 11913 ||| |||||||| | ||| | || ||| | || ||| | |||||||| | || | Sbjct 1335542 ACCGGTACCAGGAGGACCGACCAGGAGGACACCCTTGGGAAGTTTGGCACCGAGGTCGCT 1335483 Query 11914 AAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGCGGAG 11973 || | ||||| ||||| || || || || | |||| |||||||||||||| Sbjct 1335482 AA--ACTTTTCAGGGTTCTTCAGAAACTCGACGACTTCCTGGAGTTCCTCCTTGGCTTCA 1335425 Query 11974 TCGATACCCTCAACATCGGTGAAA 11997 || ||| | |||||| ||||| Sbjct 1335424 TCACAACCGTGGACATCGTTGAAA 1335401 >seq3 Length=2624975 Score = 109 bits (120), Expect = 6e-19 Identities = 260/383 (68%), Gaps = 30/383 (8%) Strand=Plus/Minus Query 11588 TGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTT-- 11645 ||| |||||| ||||| || ||||||| |||||| | ||| ||| ||||| ||||| Sbjct 678877 TGTTGAAACCATCCATCTCAGTGAGAATCTGGTTCAGGGTCGCTTCCCGCTCGTCGTTAC 678818 Query 11646 ----GGAG----GGCATACCACCTGCCGAACGCTTCTTACCGACAGCGTCAATCTCATCG 11697 | || ||| | |||| || | | || | | ||||||||||||||| Sbjct 678817 CACCGAAGCCTCGGCCGCTCTCCTGTCGGGCACGTC----CAATTGCGTCAATCTCATCG 678762 Query 11698 ATGAATACGATACACGGTTGGTTGGCACGTGCCTGTTCG---AAAAGTTCACGTACACGC 11754 || || | |||||| || || || |||| ||| || || || || ||||| Sbjct 678761 ATAAAGATGATACAGGGAGCATTCTTGCG-GCCT--TCGGCAAACAGATCTCGCACACGA 678705 Query 11755 TTCGCTCCAACACCTACGAACATCTCAACGAAGTTTG--CGGCAGAACACTGAATGAAGG 11812 | || ||||| ||||||||||||||||| | | | || | ||||||| ||||| Sbjct 678704 GAAGGACCGACACCCACGAACATCTCAACGAATTCGGAACCGCTCA-CACTGAA-GAAGG 678647 Query 11813 GAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCAC 11872 | || |||||| ||||| |||| || || | ||||| || |||||||| | | Sbjct 678646 GCACTCCAGACTCGCCAGCCGTGGCCTTGGCAAGCAACGTCTTTCCAGTACCAGGAGGGC 678587 Query 11873 CAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC--ACTTC-CAAAGTAGCGCTCAGGCT 11929 |||| || | || || || |||||||||||||| |||| | || | |||||||| Sbjct 678586 CAGCCAGGATAGCACCTCGAGGGATCTTGGCACCCAGCTTCTCGAACT---TCTCAGGCT 678530 Query 11930 TCTTGAGGAAGTCCACAATCTCC 11952 ||| |||||| |||| |||| Sbjct 678529 GCTTCAGGAAGCTAACAAACTCC 678507 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975425748400