Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769295.1_202014-10-10] 78 sequences; 43,168,069 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq2 93.3 5e-14 >seq2 Length=4137638 Score = 93.3 bits (102), Expect = 5e-14 Identities = 259/397 (65%), Gaps = 3/397 (1%) Strand=Plus/Minus Query 154711 GAAATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATGG 154770 |||| || || |||| || | || || || || || || ||||| |||| ||||| Sbjct 1040086 GAAAGGTTTGCCTGATCCCTGTTTCTGCTCACGGCACCAACCCTGCCTCCGCTGCCATGG 1040027 Query 154771 CAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGATGA---TGGTAACATAGACATCAAAG 154827 | || ||||| || || |||||||||||| | | | ||||||| | ||| || | | Sbjct 1040026 CCGGTATGAAGGTCGTCACTGTCAAGTGTGACGCTAAGACTGGTAACCTGGACGTCGAGG 1039967 Query 154828 ATCTAGAGAAGAAAGCAATCATGAATACATTTGAACTGTCATGTATTATGATTACATACC 154887 |||| || || ||| | | | |||||| | | || ||| ||||||||| Sbjct 1039966 ATCTCAAGGCCAAGTGCGTCAAGCACGCGGATGAACTTGCTGGCATCATGGTTACATACC 1039907 Query 154888 CATCTACACATGGTGTATTTGAAACTAACATTAGACAGATATGTAAGATCGTTCATGACA 154947 | || || |||||| || || | | || | ||| | || | | || || || Sbjct 1039906 CTTCCACCTTTGGTGTCTTCGAGCCCGAGATCAAGCAGGTCTGCGACCTTGTCCACGAGC 1039847 Query 154948 ATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAAC 155007 |||| |||| || || | || || || || | || || ||| | || || | | Sbjct 1039846 ATGGCGGTCTCGTCTACATGGACGGTGCCAACATGAACGCCCAGATTGGTCTCTGCAGCC 1039787 Query 155008 CATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCAC 155067 | |||| || || ||||| || ||||| ||| | || || || ||||||||||| | Sbjct 1039786 CCGGTGACATCGGCGCTGATGTCTGCCATCTCAACCTCCACAAGACCTTCTGTATTCCCC 1039727 Query 155068 ATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104 | || ||||| || || || || || ||||| | ||| Sbjct 1039726 ACGGTGGTGGTGGCCCCGGTGTTGGCCCTATCGCTGT 1039690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579212235267520