Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769295.1_202014-10-10] 78 sequences; 43,168,069 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq2 114 2e-20 >seq2 Length=4137638 Score = 114 bits (126), Expect = 2e-20 Identities = 264/397 (66%), Gaps = 3/397 (1%) Strand=Plus/Minus Query 159386 GAAATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGG 159445 |||| || || |||| || | || || || || || || ||||| || || | |||| Sbjct 1040086 GAAAGGTTTGCCTGATCCCTGTTTCTGCTCACGGCACCAACCCTGCCTCCGCTGCCATGG 1040027 Query 159446 CAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGATGA---TGGCAACATAGACATCAAAG 159502 | || ||||| || || |||||||||||| | | | ||| ||| | ||| || | | Sbjct 1040026 CCGGTATGAAGGTCGTCACTGTCAAGTGTGACGCTAAGACTGGTAACCTGGACGTCGAGG 1039967 Query 159503 ATCTAGAGAAGAAAGCAATCATGAATACATTTGAACTGTCATGTATTATGATTACATATC 159562 |||| || || ||| | | | |||||| | | || ||| ||||||| | Sbjct 1039966 ATCTCAAGGCCAAGTGCGTCAAGCACGCGGATGAACTTGCTGGCATCATGGTTACATACC 1039907 Query 159563 CATCTACACATGGTGTATTTGAAACAAACATCAGACAGATATGTAAGATTGTTCATGAGA 159622 | || || |||||| || || | | |||| ||| | || | |||| || ||| Sbjct 1039906 CTTCCACCTTTGGTGTCTTCGAGCCCGAGATCAAGCAGGTCTGCGACCTTGTCCACGAGC 1039847 Query 159623 ATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAAC 159682 |||| |||| || || | || ||||| || | || || ||| | ||||| | | Sbjct 1039846 ATGGCGGTCTCGTCTACATGGACGGTGCCAACATGAACGCCCAGATTGGTCTCTGCAGCC 1039787 Query 159683 CATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCAC 159742 | ||||| || || ||||| || ||||| ||| | || ||||| ||||||||||| | Sbjct 1039786 CCGGTGACATCGGCGCTGATGTCTGCCATCTCAACCTCCACAAGACCTTCTGTATTCCCC 1039727 Query 159743 ATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779 | || ||||| || || || || || ||||| | ||| Sbjct 1039726 ACGGTGGTGGTGGCCCCGGTGTTGGCCCTATCGCTGT 1039690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588050626650080