Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769295.1_202014-10-10] 78 sequences; 43,168,069 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq73 223 6e-53 seq33 194 3e-44 >seq73 Length=2503951 Score = 223 bits (246), Expect = 6e-53 Identities = 722/1104 (65%), Gaps = 53/1104 (5%) Strand=Plus/Plus Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCT-TGGCCTCGGG 221475 || |||||||||||||||||||||||||||||| ||||||||| |||| | ||||| || Sbjct 1796094 GTGAGGGCAGCGTGGTAGATGGTCTCAAAGATCTGCTTGTTGAG-CTCTCTAGCCTCTGG 1796152 Query 221476 AGAAGTGAAGGGCATACGCAGCATCT--GAAAGACGTCGGCCAGTCCCTGTACTCCGATA 221533 ||| ||||||||| ||||| | | ||||| | || || || |||||||| || | | Sbjct 1796153 AGACTCGAAGGGCATGCGCAG-AGCAAGGAAAG-CATCAGCAAGACCCTGTACACCAAGA 1796210 Query 221534 CCGATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGA 221591 ||||| || | ||| | | ||||| | ||| || ||| |||| || || ||||| Sbjct 1796211 CCGATAGGTCGGTGACGCATGTTGCTGTTGCGA--GCCTCTTGCACAGGGTAGTGGTTGA 1796268 Query 221592 CGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGT 221651 | ||||| | ||||| | ||| | | || | | |||| |||||||| | Sbjct 1796269 CATCGATGATCTTGTTCAAGTTGCGGACAACAACCTGACTGACCTGATGCAGCTTCTTGA 1796328 Query 221652 GATTGAACACCAACTCGCCGC--CGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAAC 221709 || | | ||| ||| | | | || || | ||||| ||||||| Sbjct 1796329 AATC--ATAGCAA---GCCTCATCATAGTTGATG---------AAAGCAGGCAGGGCAAG 1796374 Query 221710 GCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACA 221769 | ||| ||||| || || || ||||| || | |||| |||||||| || || Sbjct 1796375 GGAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGCACAGTACTCGATGATCTCAGTGCA 1796434 Query 221770 GAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTC 221829 || || || |||||| || |||| || || || |||||| || || || Sbjct 1796435 CAGATTAGAGCTTCGGATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTACAGGCATC 1796494 Query 221830 CTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAG 221889 |||||| ||||| ||||| || ||||| ||| ||| | || || | ||| || Sbjct 1796495 CTTGTAAAGCATGAAGGGGTTTCCGGTCTCGGTCTGGGCCTCGAGGATGGCATACCAAAG 1796554 Query 221890 TTCTCTGGCGCTC-----AC---CGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCG 221941 | ||||| || || || || ||| || | | |||| ||| || Sbjct 1796555 CT-TCTGGGCCTTGATGGACTTGCGACC-CTTACCTTCCCTCTCGTACTTCTC------- 1796605 Query 221942 GTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGA 222001 ||| || || | |||||| ||||||||| ||| | || || || ||| | ||| Sbjct 1796606 GTAGAGGGCCT--CAAACTCTTCACCGTAGCAGTCGGCAAGACCAGGGCACTCGTTGGGG 1796663 Query 222002 CACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCAC 222061 ||||| || |||| | ||| | | || | || |||||| ||||| |||||||| Sbjct 1796664 CACATGAGGGTCCACTCTCCGTTCTTCTCAACACGCTTCATGAAAAGGTCAGGGATCCAG 1796723 Query 222062 AGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCC 222121 || ||| | || || || | || || ||||||| |||| ||| || | ||||| Sbjct 1796724 AGGGCCAGGAACAGGTCGCGGGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCA 1796783 Query 222122 AAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGC 222181 | |||||||| | ||||||||||| ||||| || |||| || | ||| || |||||| Sbjct 1796784 AGGAACTCAAAGACATCAGCGTGCCAAGGCTCAAGGTAGATAGCAAAAGCACCAGGTCGC 1796843 Query 222182 TTGTTGCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTAC 222240 ||||| |||||||||| || | | ||| | |||||||| || || | || || Sbjct 1796844 TTGTTACCACCCTGAT-CAACGTAGCGGGCAGTGTTGTTGAAGACACGTAGCATAGGAAC 1796902 Query 222241 CAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCC---TCAGGTT 222297 | ||||||||| ||||||||| || |||||| | || ||| | | ||| Sbjct 1796903 AACACCGTTGGATGTACCGTTGGTACCAGCAATGTAGGAGCCAGTGGCACGGATTCGGT- 1796961 Query 222298 ACTGGCAGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGT 222357 |||| | || |||||||| || || || |||||||| ||| ||||||| || Sbjct 1796962 --GGGCATTGAGACCAATACCACCAGCCATCTTGGAAATCATGGCACAGGTCTTGAGGGT 1797019 Query 222358 GTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTG 222417 || ||| || || || ||||||||| | | | || || || || || | ||| Sbjct 1797020 ATCATAGATACCGTCAATGCTGTCCTCCTTCATATCAACCAAGAAGCATGAGGAAAGCTG 1797079 Query 222418 AGATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGA 222477 | || | || || ||||| || || ||||| || || || ||| | || || Sbjct 1797080 GGGTTGAGGGGTACCAGCGTTGAAGAGGGTGGGGGAAGCATGGGTGAAGAACTTGCTGGA 1797139 Query 222478 CATCAGATCGTACGTCTCTACGAC 222501 ||| || | ||| ||||| | ||| Sbjct 1797140 CATAAGGTTGTATGTCTCCAAGAC 1797163 Score = 86.0 bits (94), Expect = 1e-11 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 221116 GTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGG 221175 ||| || || ||||| || || | || || | | |||||| | ||| || ||| | || Sbjct 1795802 GTTGACAACCTGGAACTCACCAGCAAGGACTCGGCGCTGGTAAATGTTGGAGGTGTAAGG 1795861 Query 221176 TTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCAC 221235 |||| || ||||||||||||||| ||||| | || ||||| || ||||| || || | Sbjct 1795862 CTCGAAGCACTCGTTGTTGCCCAGAATCTGCGAGGTACTGGCAGTAGGCATAGGGGCAAG 1795921 Query 221236 CAGCAGACTGTTGCG 221250 ||||||||||| || Sbjct 1795922 GAGCAGACTGTTACG 1795936 >seq33 Length=5643559 Score = 194 bits (214), Expect = 3e-44 Identities = 381/563 (68%), Gaps = 3/563 (1%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | |||||||||||||| | || |||||| ||||| ||||||||||| Sbjct 146078 ATCTGGCAAATGTACAAGAAGGCCGAGGCTTCTTTCTGGACTGCCGAGGAGATTGATCTC 146137 Query 25537 GCCAAGGACATGGACGGCTGGTACGC---TCTATCCAAAGACGAGCAGCATTTTCTCAAG 25593 ||||||| | ||| ||| || ||| ||| ||||||||| || || Sbjct 146138 TCCAAGGATCTCCACGATTGGAACAACCGTCTGACCACTGACGAGCAGTTCTTCATCTCT 146197 Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 || | | || ||||| || || |||||||| || || |||||||| || ||| || Sbjct 146198 CACATCCTTGCCTTCTTCGCTGCTTCTGATGGCATTGTCAACGAGAACCTCGTTGAGCGA 146257 Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713 |||| | | || || ||| | ||||| || |||||||| ||||| || || Sbjct 146258 TTCAGCGGCGAGGTCCAGATCCCTGAGGCTCGATGCTTCTACGGATTCCAAATCATGATG 146317 Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACATTACAGACGTCGCC 25773 || ||| | ||||| ||| ||| || ||| | || ||||| | || ||| Sbjct 146318 GAGAATATTCACTCCGAGACCTATTCCCTGCTCATTGACACCTACATCAAGGAGCCTGCC 146377 Query 25774 GAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCGG 25833 || || || || || | || ||| ||| ||||| | |||||| Sbjct 146378 CAGCGAACCTACCTCTTCAACGCTGTTGATACCATTCCCTGCATCCGAAAGAAGGCTGAC 146437 Query 25834 TGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTT 25893 |||||||| |||||| | | || | |||| |||| | | || ||||| ||||| Sbjct 146438 TGGGCCATTCGATGGATCCAGGACAAGGACTCTACCTTTGCCCAACGTCTGGTTGCCTTC 146497 Query 25894 GCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAG 25953 |||||||| ||||| ||||| ||||||||| | ||||| ||||||||||||||||| || Sbjct 146498 GCTGCTGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCTGGCTCAAGAAG 146557 Query 25954 AAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTC 26013 || ||||||||| || ||| ||||||||||||||| | |||||||| || Sbjct 146558 CGTGGCCTCATGCCCGGTTTGACCTTCTCCAACGAGCTCATCTCTCGTGACGAGGGCCTT 146617 Query 26014 CACAGAGATTTTGCCTGCCTGCT 26036 |||| || ||||||||||| || Sbjct 146618 CACACCGACTTTGCCTGCCTTCT 146640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928843894376320