Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769295.1_202014-10-10] 78 sequences; 43,168,069 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq73 224 1e-53 seq22 87.8 2e-12 >seq73 Length=2503951 Score = 224 bits (248), Expect = 1e-53 Identities = 930/1442 (64%), Gaps = 49/1442 (3%) Strand=Plus/Minus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 || ||| ||||| ||||||| || | || || || || || || ||||| |||| Sbjct 1797220 CCTCAGCACATGATCATGCGTGTGTCTATTGGTATATGGGGTGATGATATTGAGCGTGTC 1797161 Query 75272 TTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTCT 75329 |||||||||||| || |||||| |||| | | ||| || || | || ||||||| Sbjct 1797160 TTGGAGACATACAACCTTATGTCCAGCAAGTTCT--TCACCCATGCTTCCCCCACCCTCT 1797103 Query 75330 TCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 75389 |||| |||||||| || ||| ||| | ||| |||||| | | | | ||||||| Sbjct 1797102 TCAACGCTGGTACCCCTCAACCCCAGCTTTCCTCATGCTTCTTGGTTGATATGAAGGAGG 1797043 Query 75390 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 75449 || || |||||||||||| || || | | ||||| || || ||| ||||| Sbjct 1797042 ACAGCATTGACGGTATCTATGATACCCTCAAGACCTGTGCCATGATTTCCAAGATGGCTG 1796983 Query 75450 GGGGTATTGGG----ATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGG 75505 | |||||||| |||| || | | ||| ||| | || ||| || Sbjct 1796982 GTGGTATTGGTCTCAATGCCCACCGAATCCGTG----CCACTGGCTCCTACATTGCTGGT 1796927 Query 75506 ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGC 75565 || || ||| ||| | ||| || |||| ||||| || || || ||| ||| || ||| Sbjct 1796926 ACCAACGGTACATCCAACGGTGTTGTTCCTATGCTACGTGTCTTCAACAACACTGCCCGC 1796867 Query 75566 TATGTAAATCAAGCGGGGCGTCGCAAGGG-----GTCCATC-GCGGTCTACTTGGAACCA 75619 || || |||| ||| || |||| | || | | || ||||| | || || Sbjct 1796866 TACGTTGATCA---GGGTGGTAACAAGCGACCTGGTGCTTTTGCTATCTACCTTGAGCCT 1796810 Query 75620 TGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCT 75679 ||||| || ||| || | ||||||||||| | ||| ||||| ||| | || |||| Sbjct 1796809 TGGCACGCTGATGTCTTTGAGTTCCTTGATCTCCGAAAGAACCACGGTAAGGAGGAGGTC 1796750 Query 75680 CGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAG 75739 || | || || || |||| ||||| || ||||||||||||||||| |||||| Sbjct 1796749 CGCGCCCGCGACCTGTTCCTGGCCCTCTGGATCCCTGACCTTTTCATGAAGCGTGTTGAG 1796690 Query 75740 GAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTG 75799 || || | ||| | || | || || || || || ||||| ||||| Sbjct 1796689 AAGAACGGAGAGTGGACCCTCATGTGCCCCAACGAGTGCCCTGGTCTTGCCGACTGCTAC 1796630 Query 75800 GGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTA-GAGCCAATGCGAC 75858 ||||| |||||||| ||||||||| ||||| || ||| |||| | | | || | Sbjct 1796629 GGTGAAGAGTTTGAGGCCCTCTACGAGAAGTACGAGAGGGAAGGTAAGGGTC---GCAAG 1796573 Query 75859 TGTACCA-GCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACA 75916 | | || | | | || | ||||| | || || ||| | | ||||| ||||| |||| Sbjct 1796572 TCCATCAAGGCCCAGAAGCTTTGGTATGCCATCCTCGAGGCCCAGACCGAGACCGGAAAC 1796513 Query 75917 CCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACA 75976 || | ||||||||||||||||| |||||| ||||| ||||| ||||| | || || Sbjct 1796512 CCCTTCATGCTTTACAAGGATGCCTGTAACCGCAAGAGCAACCAGAAGAACCTCGGCACC 1796453 Query 75977 ATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCT 76036 ||| ||||| ||||| ||||| || || | |||||| | |||||| ||| Sbjct 1796452 ATCCGAAGCTCTAATCTGTGCACTGAGATCATCGAGTACTGTGCCCCTGATGAGGTCGCT 1796393 Query 76037 GTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCA---ATGAAGAGACTCGCACT 76093 |||||||| | || || | ||||| || | ||| |||| ||| || || Sbjct 1796392 GTTTGCAACCTTGCCTCCCTTGCCCTGCCTGCTTTCATCAACTATGATGAGGCTTGC--- 1796336 Query 76094 TTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTC 76153 | ||||| | || || ||| | ||| || ||||| | || | ||| || Sbjct 1796335 TATGATTTCAAGAAGCTGCATCAGGTCAGTCAGGTTGTTGTCCGCAACTTGAACAAGATC 1796276 Query 76154 ATTGACAGAAATTTTTATCCCGT---TGAGACTGCGCGAAAGTCTAATATGCGACACAGA 76210 || || || || || || ||| || ||| | || || ||||| ||| || Sbjct 1796275 ATCGATGTCAACCACTACCCTGTGCAAGAGGCT-CGCAACAG--CAACATGCGTCACCGA 1796219 Query 76211 CCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATT-TTGTGCCGCTACGCATT 76269 ||||| ||| | ||||| || ||||| || |||| || || | || ||| | || Sbjct 1796218 CCTATCGGTCTTGGTGTACAGGGTCTTGCTGATGCTTTCCTTGCTCTG-CGCATGCCCTT 1796160 Query 76270 TGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATC 76329 || || || || | ||| | || | |||||||| ||||| || ||||| | Sbjct 1796159 CGAGTCTCCAGAGGCTAGAGAGCTCAACAAGCAGATCTTTGAGACCATCTACCACGCTGC 1796100 Query 76330 CCTGGAGGCGAGTTGTG-AATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTT 76388 ||| || ||| | ||||| | | | ||| |||| || || |||||| Sbjct 1796099 CCTCACTGC-CTCCGTGCAGTTGGCCAAGGAGGAGGGTCCCTACTCTACCTTCAAGGGTT 1796041 Query 76389 CTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGC-TCAAC 76447 ||||||| || | || | || ||||| || |||| |||| || || || | | Sbjct 1796040 CTCCCGCCTCTGAGGGTATCCTCCAGTTCGACATGT-GGAACGTCAAGCCTTCCGACCTT 1795982 Query 76448 TACGACTGGGA-TGTTCTCAAG-GAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTT 76505 | |||||||| | || || | | | | ||| || ||| | ||||||||||| Sbjct 1795981 TGGGACTGGGAGAGCCTTCGAGAGGATG--TTAAGACTAACGGTATCCGTAACAGTCTGC 1795924 Query 76506 TGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTG 76565 | | || || ||||| || ||| ||| | || || |||| || || || ||||| | Sbjct 1795923 TCCTTGCCCCTATGCCTACTGCCAGTACCTCGCAGATTCTGGGCAACAACGAGTGCTTCG 1795864 Query 76566 AACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCA 76625 | || ||||| | ||||| |||| | | || ||| || |||||||| |||||| Sbjct 1795863 AGCCTTACACCTCCAACATTTACCAGCGCCGAGTCCTTGCTGGTGAGTTCCAGGTTGTCA 1795804 Query 76626 AC 76627 || Sbjct 1795803 AC 1795802 >seq22 Length=6460479 Score = 87.8 bits (96), Expect = 2e-12 Identities = 201/294 (68%), Gaps = 14/294 (5%) Strand=Plus/Plus Query 175213 GCCAAAGATGAACTTGAAGAGATTGTGGATTTTCTCAAGCAACCCGAGAGATATTTTG-G 175271 ||||| || ||||| | || | || || ||||| ||| ||||| || | ||| | | Sbjct 1335429 GCCAAGGAGGAACTCCAGGAAGTCGTCGAGTTTCTGAAG-AACCCT-GAAAAGTTTAGCG 1335486 Query 175272 AAGT-GGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGA 175330 | | |||||||| | ||| || | ||| || | ||| || ||||| || |||| Sbjct 1335487 ACCTCGGTGCCAAACTTCCCAAGGGTGTCCTCCTGGTCGGTCCTCCTGGTACCGGTAAGA 1335546 Query 175331 CCCTCCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATCCAG-TGCTCTGCC 175389 | |||||||| ||||| | || |||||| | ||| || ||| || | || | || Sbjct 1335547 CGCTCCTCGCTCGAGCTGTTGCTGGTGAAGCTGGTGTTCCGTTCTTCTACATGTCCGGCA 1335606 Query 175390 GCAAACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAA 175449 | || |||| ||||| || |||||||| || ||||| | || || || |||||| Sbjct 1335607 GTGAA-TTTGACGAGATCTTCGTTGGTGTTGGAGCCAAGCGAGTCCGTGAACTCTTTA-- 1335663 Query 175450 ATCGCCCGCGAAAATCAA----CCATGTATTGTCTTCATTGATGAGATTGATGC 175499 | |||| || | ||| || | |||||||||||||||||| ||||||| Sbjct 1335664 --CTGCCGCCAAGAACAAGTCTCCCTCTATTGTCTTCATTGATGAACTTGATGC 1335715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569018344640