Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769295.1_202014-10-10] 78 sequences; 43,168,069 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq73 185 3e-41 seq33 132 1e-25 seq22 122 3e-22 >seq73 Length=2503951 Score = 185 bits (204), Expect = 3e-41 Identities = 584/898 (65%), Gaps = 13/898 (1%) Strand=Plus/Plus Query 155640 ATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTG 155699 |||||| |||||| ||||| || ||||||||| | ||||||||||| || | | Sbjct 1796424 ATCTCAGTGCACAGATTAGAGCTTCGGATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGG 1796483 Query 155700 TTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATC 155759 ||||| ||||||||||| || ||| | ||| |||| ||||| |||| || || || || Sbjct 1796484 TTACAGGCATCCTTGTAAAGCATGAAGGGGTTTCCGGTCTCGGTCTGGGCCTCGAGGATG 1796543 Query 155760 TTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTTC 155819 ||| || | |||| || || |||| | |||||| ||| || ||| Sbjct 1796544 GCATACCAAAGCTTCTGGGCCTTGATGGACTTGCGACCCTTACCTTCCCTCTCGTACTTC 1796603 Query 155820 ATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGG 155879 || || | | || |||||||| || || || |||||||||| | |||| Sbjct 1796604 TCGTAGAGGGCCTCAAACTCTTCACCGTAGCAGTCGGCAAGACCAGGGCACTCGTTGGGG 1796663 Query 155880 CAAAACAGCGACCAAATT---TTATTACCGATTACACGCTCCATAAATACATCACTCGCC 155936 || | || | ||| | || || | | |||||| ||| || | ||| | Sbjct 1796664 CACATGAGGGTCCACTCTCCGTTCTTCTCAA---CACGCTTCATGAAAAGGTCAGGGATC 1796720 Query 155937 CAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGC 155996 || | || ||| ||||| | || |||||| | ||||| ||||| || || Sbjct 1796721 CAGAGGGCCAGGAACAGGTCGCGGGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGA 1796780 Query 155997 TCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTC 156056 || | ||| || | ||||| || ||||| || || ||||||||| |||| Sbjct 1796781 TCAAGGAACTCAAAGACATCAGCGTGCCAAGGCTCAAGGTAGATAGCAAAAGCACCAGGT 1796840 Query 156057 CTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGA 156113 | |||| ||||||||||| || || || ||||| || |||||||||| |||||||||| Sbjct 1796841 CGCTTGTTACCACCCTGATCAACGTAGCGGGCAGTGTTGTTGAAGACACGTAGCATAGGA 1796900 Query 156114 ATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTA 156173 | || ||| ||||| || || ||||| || ||| | || |||| | || | Sbjct 1796901 ACAACACCGTTGGATGTACCGTTGGTACCAGCAATGTAGGAGCCAGTGGCACGGATTCGG 1796960 Query 156174 TGAATATGTAGTCCAATACCACCTGACCAT-TTAGAAATTTGAGCGCATTCCTTTACAGT 156232 || || || ||||||||||| | |||| || ||||| || || ||| | || Sbjct 1796961 TGGGCATTGAGACCAATACCACCAG-CCATCTTGGAAATCATGGCACAGGTCTTGAGGGT 1797019 Query 156233 ATTGAAAATACCTTCAATAGAATCATCTTCCAT-TGATAGTAGATAGCACGAACTTAATT 156291 || | ||||| ||||| || || | ||| | | ||| |||| || | | Sbjct 1797020 ATCATAGATACCGTCAATGCTGTCCTCCTTCATATCAACCAAGA-AGCATGAGGAAAGCT 1797078 Query 156292 GAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAG 156351 | ||| | || || ||||||||||| || || || | ||||| | || |||| | | Sbjct 1797079 GGGGTTGAGGGGTACCAGCGTTGAAGAGGGTGGGGGAAGCATGGGTGAAGAACTTGCTGG 1797138 Query 156352 ACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAGATAGAGA 156411 ||||| | |||||||||| | ||||| || | || |||| ||||| | Sbjct 1797139 ACATAAGGTTGTATGTCTCCAAGACACGCTCAATATCATCACCCCATATACCAATAGACA 1797198 Query 156412 CCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGTATG 156471 | | ||| ||| ||||||||||| || |||||| || ||||| || ||||||| Sbjct 1797199 CACGCATGATCATGTGCTGAGGACGTTCGACAATCTTGCCGTCAATCTTGAGGAGGTATG 1797258 Query 156472 CGCGTTCCAGAGTTTTAAACCCGAAATAATCAAACAGAAAATCACGGTTGTAATCAAT 156529 || |||| || || || || || || | | | |||||||||| ||| |||| Sbjct 1797259 ATCGCTCCAACGTCTTGAAGCCAAAGTATTGGTATTGGAAATCACGGTCGTAGACAAT 1797316 >seq33 Length=5643559 Score = 132 bits (146), Expect = 1e-25 Identities = 229/333 (69%), Gaps = 0/333 (0%) Strand=Plus/Plus Query 133339 GATGGAAAATATCCATTCTATCACATATTCTACTCTAATTGATACTTACATCAAAGATAC 133398 |||||| ||||| || || || ||||| || ||||| || |||||||| || | Sbjct 146314 GATGGAGAATATTCACTCCGAGACCTATTCCCTGCTCATTGACACCTACATCAAGGAGCC 146373 Query 133399 CGTCCAGAAGCACAAACTATTCAACGCCATTAGCGAATTTCCTTGTATTAAAAAGAAATC 133458 | |||| | | || |||||||| || |||| || || |||||| | Sbjct 146374 TGCCCAGCGAACCTACCTCTTCAACGCTGTTGATACCATTCCCTGCATCCGAAAGAAGGC 146433 Query 133459 TGACTGGGCTATTAAATGGATCCAGGACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGC 133518 ||||||||| ||| |||||||||||||||| | | ||||| ||||| ||||| Sbjct 146434 TGACTGGGCCATTCGATGGATCCAGGACAAGGACTCTACCTTTGCCCAACGTCTGGTTGC 146493 Query 133519 TTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGTTCTGCTCTATTTTTTGGCTTAA 133578 || |||| || ||||| || || ||||| ||||| || ||| || || ||||| || Sbjct 146494 CTTCGCTGCTGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCTGGCTCAA 146553 Query 133579 AAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACGAACTTATTTCAAGGGACGAGGC 133638 |||||||| | | || || || || || ||||| || || || | ||||||| Sbjct 146554 GAAGCGTGGCCTCATGCCCGGTTTGACCTTCTCCAACGAGCTCATCTCTCGTGACGAGGG 146613 Query 133639 ACTTCACACCGAATTTGCCGTTTTACTTCACTC 133671 ||||||||||| |||||| | |||||||| Sbjct 146614 CCTTCACACCGACTTTGCCTGCCTTCTTCACTC 146646 Score = 87.8 bits (96), Expect = 5e-12 Identities = 114/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 251407 ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGA 251466 || || ||||| | | || || ||||| | | ||||||| || | ||| | | || Sbjct 1963598 ATGAGTCCACAAATTTCGCAGACGTGGACTCGGAAAGCATCCGACACCTCAAACAAACGC 1963657 Query 251467 CCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAA 251526 |||| ||| || || ||||| | ||||||||||||||| ||||| || ||||| Sbjct 1963658 TCCTTCAAGAAAGCAGCAGCGCCGTGAGCAATCATACAATCACGTTCCATCTCTCCGAAT 1963717 Query 251527 CGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTG 251564 || ||||||||||| ||||| | ||| || ||||||| Sbjct 1963718 CGGAGACCACCATCTCGAGCACGACCTTCCACAGGCTG 1963755 >seq22 Length=6460479 Score = 122 bits (134), Expect = 3e-22 Identities = 205/295 (69%), Gaps = 4/295 (1%) Strand=Plus/Minus Query 302572 TCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCT 302631 ||||||| | ||||| || || |||||||| || || ||| | || || ||||| Sbjct 4507342 TCTTCCAGAGCCTTGACCAATCGTCGCTGAATGTAGCCTGTTTCGGCAGTCTTGACAGCA 4507283 Query 302632 GTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGC 302691 ||||| || ||||| | |||||| |||| || |||||||| | ||| || || Sbjct 4507282 GTATCGATAAGACCTTCTCGACCAGCCATGGCGTGGAAGAAGAACTCGCTAGGGGTAAGA 4507223 Query 302692 CCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTA 302751 || | || | ||| |||||||||||||||| || ||||| || | || |||||| Sbjct 4507222 CCACGAAGGTAAGAGTTCTCAACGAAACCACGAGCTTCGGGTGAGTAATCATCCTTGGTG 4507163 Query 302752 AAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGC 302811 || || |||||||| | || || | ||| | || ||||| || || ||||| | ||| Sbjct 4507162 AAATGAGGCAGGGTGCGGTACTTGAAACCGAAAGGAATACGTTTGCCTTCAACAATTTGC 4507103 Query 302812 TGTCCCAGGCACGA--AATCATCTGCGAAATATTTAAATCACTGCCCTTGGAGCC 302864 || || | || || | ||||||| ||||| || | | | |||||||| || Sbjct 4507102 TGACC--GACAAGAGCAGTCATCTGTGAAATGTTGATAGAAGAACCCTTGGAACC 4507050 Score = 93.3 bits (102), Expect = 1e-13 Identities = 105/140 (75%), Gaps = 3/140 (2%) Strand=Plus/Minus Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872 |||||||| | | ||| || |||||| | || ||||| |||||||| |||||||| Sbjct 4508119 AGAATTTCCTTGAGACGCGGCACACCAAGAGTAACGTT---CTTGGACGACACACCAGCG 4508063 Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932 || |||||||| ||||| || | || |||| ||||||||||| || || || | Sbjct 4508062 AAATGGAAAGTGTTCAGTGTCATCTGGGTAGCGGGCTCACCAATGGACTGGGCAGCCAAA 4508003 Query 301933 ATACCAACCATTTCTCCTGG 301952 | ||||||||||||||| || Sbjct 4508002 ACACCAACCATTTCTCCAGG 4507983 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471816129102286