Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769295.1_202014-10-10] 78 sequences; 43,168,069 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq2 134 1e-26 seq44 131 2e-25 seq33 118 1e-21 seq12 104 2e-17 >seq2 Length=4137638 Score = 134 bits (148), Expect = 1e-26 Identities = 155/206 (75%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||||||||| ||||| || |||||||| | ||| | | | ||||| |||| Sbjct 2555442 ATGGAGGGTGGACTCCTTCTGGATGTTGTAATCAGAGAGGGTGCGGCCA-TCCTCAAGCT 2555384 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 ||||||| ||| |||| | ||||||||||| ||||||||||| |||||||| |||| Sbjct 2555383 GCTTGCCAGCGAAAATCAATCGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGAATCT 2555324 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||||| | || | ||||||| | ||| || |||| ||||| ||| ||||||| Sbjct 2555323 TGGACTTGACATTGTCGATAGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGG 2555264 Query 133636 TCAGAGTTTTTACGAAAATCTGCATG 133661 ||| || || ||||| || |||||| Sbjct 2555263 TCAAGGTCTTGACGAAGATTTGCATG 2555238 Score = 118 bits (130), Expect = 1e-21 Identities = 147/199 (74%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| ||||| ||||| |||||||| |||| || ||| ||| |||||| |||||||| | Sbjct 2556174 GGTAGACTCCTTCTGGATATTGTAGTCGCTCAAAGTGCGACC-GTCCTCCAGCTGCTTAC 2556116 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | || || ||||||||||| || || || || |||||||| ||||| || Sbjct 2556115 CAGCGAAGATAAGACGCTGCTGGTCAGGGGGAATACCCTCCTTGTCTTGAATCTTGCTCT 2556056 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | |||| |||||| | | || || || | ||||| || || || || |||| Sbjct 2556055 TCACGTTGTCAATAGTGTCGCTTGATTCGACCTCAAGGGTGATAGTCTTTCCAGTGAGAG 2555996 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || |||||||||||||| Sbjct 2555995 TCTTGACGAAAATCTGCAT 2555977 Score = 93.3 bits (102), Expect = 4e-14 Identities = 135/188 (72%), Gaps = 2/188 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 ||||| || ||||| || ||||| ||| | | || | | | ||||| ||||||||||| Sbjct 2555717 GTGGATTCCTTCTGGATGTTGTAGTCGGCGAGGGTTCGGCCA-TCCTCAAGCTGCTTGCC 2555659 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || || ||||| ||||||||||| || || |||||||| |||||| ||| Sbjct 2555658 AGCAAAGATCAGGCGCTGTTGGTCGGGAGGAATACCCTCCTTGTCCTGGATCTTCGACTT 2555599 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | || |||| || ||| || || | |||| ||| ||||| || || || Sbjct 2555598 GACGTTGTCGATGGTATCGGAGGACTCGACCTCAAGAGTGATGGTCTTGCCAGTGAGGGT 2555539 Query 133643 TTTTACGA 133650 || |||| Sbjct 2555538 CTTGACGA 2555531 >seq44 Length=1303881 Score = 131 bits (144), Expect = 2e-25 Identities = 150/199 (75%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| ||||| || ||||| |||| || ||| | | | |||||||||||||| || Sbjct 485436 GTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCA-TCCTCGAGCTGCTTACC 485494 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || || ||||||||||| || || ||||| |||||||| |||||| ||| Sbjct 485495 AGCAAAGATAAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTT 485554 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | |||| ||||||| | |||||| || | ||||| || || || || || || Sbjct 485555 GACGTTGTCAATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGT 485614 Query 133643 TTTTACGAAAATCTGCATG 133661 || ||||||||||||||| Sbjct 485615 CTTGACGAAAATCTGCATG 485633 >seq33 Length=5643559 Score = 118 bits (130), Expect = 1e-21 Identities = 344/525 (66%), Gaps = 21/525 (4%) Strand=Plus/Minus Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 || ||| || |||| || ||||| || ||||| || ||||| | | || ||||| | Sbjct 146923 CTGGTAGTCAGCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGGGAGATGTTCTC 146864 Query 120411 CATAAACTCGAACGGGTTGCTCGCGTT--AAAGTATTTCGGCTGGCCCAACTGTACGAGC 120468 ||| || ||||| ||||| | || || ||| | ||| | ||| | ||||| Sbjct 146863 CATGAAGTCGAAGGGGTTTGTGGCCTTGTAAACCTTCTCG--TTGCCGAGAGCGACGAGT 146806 Query 120469 AGTCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAAC 120528 || ||||| || |||||||||||||||| ||| | | ||||||||| |||| Sbjct 146805 AGACGGTCAGCGACAAACTCAATGTACTGCTTCATCAGGTTGGAGTTCATGCCAAGCAGG 146746 Query 120529 GCCACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATG 120588 || || | ||| |||| ||||||| ||||||| || || || | ||| Sbjct 146745 GCACAGGGGAGAGCCTCAGTGAGGAACTCCTGCTCAATGGTGACGGCATCACAAATGATG 146686 Query 120589 GCGAGCATAGTGTG-------GCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAG 120641 | | || | || || ||| |||| | ||| | || | || | | Sbjct 146685 TCCTGGATCATCTGCTTGCTAGCACGGCC-CTTGAG----ATGGGAGT---GAAGAA--G 146636 Query 120642 GCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAG 120701 ||| |||||||| ||||| ||||||||||| || || || ||||||||| || |||| Sbjct 146635 GCAGGCAAAGTCGGTGTGAAGGCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAA 146576 Query 120702 GCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAA 120761 |||||||||| ||| | |||||| |||| |||| ||||||| || ||||| Sbjct 146575 ACCGGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAA 146516 Query 120762 CACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTC 120821 | ||||| || || ||||| |||| || | ||| || || | |||| | Sbjct 146515 GATACCCTCGACAGCAGCGAAGGCAACCAGACGTTGGGCAAAGGTAGAGTCCTTGTCCTG 146456 Query 120822 GATCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGGCAT 120866 |||||| |||||||| || ||||| || || | ||| || || Sbjct 146455 GATCCATCGAATGGCCCAGTCAGCCTTCTTTCGGATGCAGGGAAT 146411 >seq12 Length=4746347 Score = 104 bits (114), Expect = 2e-17 Identities = 111/147 (76%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 |||||||||||||| || ||| | || || ||||| ||||| || || ||||| |||||| Sbjct 3789948 TCCTCGAGCTGCTTACCAGCGAAGATCAGTCGCTGTTGGTCCGGGGGAATGCCCTCCTTG 3789889 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||| | || | ||||| | || ||| || |||| ||||| | Sbjct 3789888 TCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATG 3789829 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAA 133652 || ||||| ||||| || || |||||| Sbjct 3789828 GTCTTGCCCGTCAGGGTCTTGACGAAA 3789802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420328664720