Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769295.1_202014-10-10] 78 sequences; 43,168,069 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq2 109 1e-18 >seq2 Length=4137638 Score = 109 bits (120), Expect = 1e-18 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||| ||||| || ||||| | || || ||| ||| Sbjct 2555980 CAGATTTTCGTCAAGACTCTCACTGGAAAGACTATCACCCTTGAGGTCGAATCAAGCGAC 2556039 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| ||||||||||| || || || ||| || ||| || Sbjct 2556040 ACTATTGACAACGTGAAGAGCAAGATTCAAGACAAGGAGGGTATTCCCCCTGACCAGCAG 2556099 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | ||||||||||| || |||||| |||| || || | |||||| ||| ||||| || Sbjct 2556100 CGTCTTATCTTCGCTGGTAAGCAGCTGGAGGACGGTCGCACTTTGAGCGACTACAATATC 2556159 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||| |||||||| |||||||||||| | ||||||| Sbjct 2556160 CAGAAGGAGTCTACCCTTCACCTTGTTCTCCGACTTCG 2556197 Score = 98.7 bits (108), Expect = 2e-15 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 ||||||| | |||||||||||| |||||||| ||||||| ||| ||||| |||||| Sbjct 2556197 CGAAGTCGGAGAACAAGGTGAAGGGTAGACTCCTTCTGGATATTGTAGTCGCTCAAAGTG 2556138 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 | || || ||||||||||| || ||||||||||| || || || Sbjct 2556137 CGACCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTG 2556094 Score = 93.3 bits (102), Expect = 1e-13 Identities = 138/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || || || |||||||| ||||| |||||||| || |||||||| |||| Sbjct 2555763 CAAGACCCTTACCGGAAAAACCATCACATTGGAAGTCGAGTCATCTGACACCATCGACAA 2555822 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| ||||| || || || || || ||| || ||| || |||||||||| Sbjct 2555823 CGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAACAGCGACTTATCTT 2555882 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||| || ||||| | || || ||| | || | | || |||||| | ||||| ||||| Sbjct 2555883 CGCTGGCAAGCAACTAGAGGACGGACGAACCCTTTCTGACTACAACATTCAGAAGGAGTC 2555942 Query 206364 TACTCTTCACCTTGTT 206379 ||||| ||| | ||| Sbjct 2555943 AACTCTGCACTTGGTT 2555958 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181819618917838