Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769295.1_202014-10-10] 78 sequences; 43,168,069 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq73 251 8e-62 seq33 120 4e-22 seq22 113 5e-20 >seq73 Length=2503951 Score = 251 bits (278), Expect = 8e-62 Identities = 943/1452 (65%), Gaps = 69/1452 (5%) Strand=Plus/Minus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGG--AAGACATTGATTCTG 104279 || ||| ||||| ||||||| ||| | || ||||| |||||| | || ||||| || Sbjct 1797220 CCTCAGCACATGATCATGCGTGTGTCTATTGGTAT--ATGGGGTGATGATATTGAGCGTG 1797163 Query 104280 TCTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCT 104337 |||||||||||||| || |||||| |||| | | ||| || || | || ||||| Sbjct 1797162 TCTTGGAGACATACAACCTTATGTCCAGCAAGTTCT--TCACCCATGCTTCCCCCACCCT 1797105 Query 104338 CTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGA 104397 |||||| |||||||| || |||||| | ||| |||||| | | | | ||||| Sbjct 1797104 CTTCAACGCTGGTACCCCTCAACCCCAGCTTTCCTCATGCTTCTTGGTTGATATGAAGGA 1797045 Query 104398 GGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGC 104457 |||| || |||||||||||| || || | | ||||| || || ||| ||| Sbjct 1797044 GGACAGCATTGACGGTATCTATGATACCCTCAAGACCTGTGCCATGATTTCCAAGATGGC 1796985 Query 104458 TGGGGGTATTGGG----ATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGG 104513 ||| |||||||| |||| || | | ||| ||| | || ||| | Sbjct 1796984 TGGTGGTATTGGTCTCAATGCCCACCGAATCCGTG----CCACTGGCTCCTACATTGCTG 1796929 Query 104514 GGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGC 104573 | || || ||| ||| | ||| || |||| ||||| || || || ||| ||| || | Sbjct 1796928 GTACCAACGGTACATCCAACGGTGTTGTTCCTATGCTACGTGTCTTCAACAACACTGCCC 1796869 Query 104574 GCTATGTAAATCAAGCTGGGCGT---CGAAAGGGATCTATCGCAGTCTATCTTGAGCCAT 104630 |||| || |||| | ||| ||| || || | || |||| |||||||| | Sbjct 1796868 GCTACGTTGATCAGGGTGGTAACAAGCGACCTGGTGCTTTTGCTATCTACCTTGAGCCTT 1796809 Query 104631 GGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGC 104690 ||||||| ||| || | ||||||||||| | || ||||| ||| | ||||||| | Sbjct 1796808 GGCACGCTGATGTCTTTGAGTTCCTTGATCTCCGAAAGAACCACGGTAAGGAGGAGGTCC 1796749 Query 104691 GGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGG 104750 | |||||| || ||| || |||||||| || || || ||||||||| | |||||| Sbjct 1796748 GCGCCCGCGACCTGTTCCTGGCCCTCTGGATCCCTGACCTTTTCATGAAGCGTGTTGAGA 1796689 Query 104751 AGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGG 104810 ||| || | ||| | ||| | || || || || |||||||| |||| | | Sbjct 1796688 AGAACGGAGAGTGGACCCTCATGTGCCCCAACGAGTGCCCTGGTCTTGCCGACTGCTACG 1796629 Query 104811 GTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGG 104870 |||| |||||||| ||||| ||| ||||||||| |||||| || | | || | | Sbjct 1796628 GTGAAGAGTTTGAGGCCCTCTACGAGAAGTACGAGAGGGAAGGTAAGG-GTC-GCAA--G 1796573 Query 104871 TGCCAGC--TGCC--GATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTAC 104925 | ||| | ||| || | | ||| | || || ||| || | || |||||||| || | Sbjct 1796572 T-CCATCAAGGCCCAGAAGCTTTGGTATGCCATCCTCGAGGCCCAGACCGAGACCGGAAA 1796514 Query 104926 ACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGT 104985 || | |||||||||||| || |||||||||| ||||| || || ||||| | || Sbjct 1796513 CCCCTTCATGCTTTACAAGGATGCCTGTAACCGCAAGAGCAACCAGAAGAACCTCGGCAC 1796454 Query 104986 GATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGC 105045 ||| || || ||||| || || || ||| | || | | | |||||| || Sbjct 1796453 CATCCGAAGCTCTAATCTGTGCACTGAGATCATCGAGTACTGTGCCCCTGATGAGGTCGC 1796394 Query 105046 TGTGTGTAACCTCGCATCAATCGCTCTCCC---------CAAGTATGTGGATCCAGAGAC 105096 ||| || ||||| || || | || || || ||| ||| ||| ||| | Sbjct 1796393 TGTTTGCAACCTTGCCTCCCTTGCCCTGCCTGCTTTCATCAACTAT---GAT---GAGGC 1796340 Query 105097 AAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAA 105156 | ||||| | || || || | || | | ||| | ||| | || Sbjct 1796339 ---TTGCTATGATTTCAAGAAGCTGCATCAGGTCAGTCAGGTTGTTGTCCGCAACTTGAA 1796283 Query 105157 CAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACA 105216 || | || ||| || ||||| || | ||||| || || ||| | || Sbjct 1796282 CAAGATCATCGATGTCAACCACTACCCTGTGCAAGAGGCTCGCAACAGCAACATGCGTCA 1796223 Query 105217 CCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACG 105275 ||| || || ||||| ||||| |||||||| || |||| ||| || || || ||| Sbjct 1796222 CCGACCTATCGGTCTTGGTGTACAGGGTCTTGCTGATGCTTTCCTTGCTCTG-CGCATGC 1796164 Query 105276 CATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACG 105335 | || || || || || | || |||| || || ||||||||||| || |||| Sbjct 1796163 CCTTCGAGTCTCCAGAGGCTAGAGAGCTCAACAAGCAGATCTTTGAGACCATCTACCACG 1796104 Query 105336 CCGCTCTTGAGGC--GAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGA 105393 | || || || || | ||||||| ||| || ||||| || ||||| | Sbjct 1796103 CTGCCCTCACTGCCTCCGTGC--AGTTGGCCAAGGAGGAGGGTCCCTACTCTACCTTCAA 1796046 Query 105394 GGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAG-C 105452 ||||||||| || || | || | || || || || |||| |||| || |||| | Sbjct 1796045 GGGTTCTCCCGCCTCTGAGGGTATCCTCCAGTTCGACATGT-GGAACGT-----CAAGCC 1795992 Query 105453 TTC--AC---TACGACTGGGA-AGCTCTCAAG-GAACGCATCAAGGAGAAGGGTCTTCGT 105505 ||| || | |||||||| ||| || || | | | | ||| || ||| | ||| Sbjct 1795991 TTCCGACCTTTGGGACTGGGAGAGCCTTCGAGAGGATG--TTAAGACTAACGGTATCCGT 1795934 Query 105506 AACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAAT 105565 |||||||| ||| | || || ||||| || ||| ||| | || || |||| || || Sbjct 1795933 AACAGTCTGCTCCTTGCCCCTATGCCTACTGCCAGTACCTCGCAGATTCTGGGCAACAAC 1795874 Query 105566 GAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTT 105625 || ||||| || || ||||| | ||||| || | | | || ||| || || ||||| Sbjct 1795873 GAGTGCTTCGAGCCTTACACCTCCAACATTTACCAGCGCCGAGTCCTTGCTGGTGAGTTC 1795814 Query 105626 GTGATTGTCAAC 105637 | |||||||| Sbjct 1795813 CAGGTTGTCAAC 1795802 >seq33 Length=5643559 Score = 120 bits (132), Expect = 4e-22 Identities = 351/524 (67%), Gaps = 15/524 (3%) Strand=Plus/Plus Query 94441 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGACTCTAAATGAA 94500 |||||||| || ||| | |||||||| |||||| | |||||||||| | | ||| Sbjct 146114 TGGACTGCCGAGGAGATTGATCTCTCCAAGGATCTCCACGATTGGAACAACCGTC-TGAC 146172 Query 94501 AA-TGAAAAGAAATTCATAAAAT---ACATCCTGGCATTCTTTGCTGGATCCGATGGAAT 94556 | ||| || | ||| | | | ||||||| || ||||| |||| || ||||| || Sbjct 146173 CACTGACGAGCAGTTCTTCATCTCTCACATCCTTGCCTTCTTCGCTGCTTCTGATGGCAT 146232 Query 94557 TGTTTTTGAGAATATCAATAA-CAACTTTGCTGATGAGGTGCA-ATCCTCTGAAGCGAGA 94614 ||| ||||| || | | | | | || | ||||| || |||| |||| || || Sbjct 146233 TGTCAACGAGAACCTCGTTGAGCGATTCAGCGGC-GAGGTCCAGATCC-CTGAGGCTCGA 146290 Query 94615 TCCTTCTATGCGTATCAGTGTCATAATGAA-ATGGTGCATGGGGAGACATACAGTAAACT 94673 | |||||| | | || |||| ||| | | | || ||||| || || Sbjct 146291 TGCTTCTACGGATTCCAAA-TCATGATGGAGAATATTCACTCCGAGACCTATTCCCTGCT 146349 Query 94674 CATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGC-AGCTCTTTGAAGCCATCCAAA 94732 ||| |||| || || ||||| ||| || ||| | | ||||| | || | | | Sbjct 146350 CATTGACACCTACATCAAGGAGCCTGCCCAGC-GAACCTACCTCTTCAACGCTGTTGATA 146408 Query 94733 CAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCG 94791 | |||| || || | |||||| || || ||||| || ||| | | |||| | | Sbjct 146409 CCATTCCCTGCATCCGAAAGAAGGCTGACTGGGCCATTCGATGGATCCAGGACAAGGACT 146468 Query 94792 CGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGT 94851 | | ||||||| | || || | || || || ||| ||||||||||||||| ||| Sbjct 146469 C-TACCTTTGCCCAACGTCTGGTTGCCTTCGCTGCTGTCGAGGGTATCTTCTTCAGCGGT 146527 Query 94852 TCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCC 94911 |||| | | || | |||||||||||||| || |||||||| ||| | ||||||| Sbjct 146528 GCCTTTGCCTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCCGGTTTGACCTTCTCC 146587 Query 94912 AACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 |||||||| ||||||||||||||||| || ||| || ||||| Sbjct 146588 AACGAGCTCATCTCTCGTGACGAGGGCCTTCACACCGACTTTGC 146631 >seq22 Length=6460479 Score = 113 bits (124), Expect = 5e-20 Identities = 208/295 (71%), Gaps = 14/295 (5%) Strand=Plus/Minus Query 9703 GGCATCAATCTCATCAATGAAGACGATGCATGG----TTGATTTTCGCGAGCGACTTCAA 9758 |||||||| |||||||||||||| || | || ||| | || ||| || | | || Sbjct 1335716 GGCATCAAGTTCATCAATGAAGACAATAGAGGGAGACTTGTTCTTGGCG-GC-AGT--AA 1335661 Query 9759 AGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGG 9818 |||| || || || |||||||| || |||||||| || ||||| |||| || | || | Sbjct 1335660 AGAGTTCACGGACTCGCTTGGCTCCAACACCAACGAAGATCTCGTCAAA-TTCACTGCCG 1335602 Query 9819 AACAT-TGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTA 9877 |||| | || ||| || ||| || |||||| |||| ||||| ||||| || |||||| Sbjct 1335601 GACATGTAGAAGAACGGAACACCAGCTTCACCAGCAACAGCTCGAGCGAGGAGCGTCTTA 1335542 Query 9878 CCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC-ACTTC-CAA 9935 || ||||| || ||| | |||||| |||| |||| ||||| || | || | | Sbjct 1335541 CCGGTACCAGGAGGACCGACCAGGAGGACACCCTTGGGAAGTTTGGCACCGAGGTCGCTA 1335482 Query 9936 AGTATCTCTCAGGTTGCTTAAGAAAATCCACAATTTCTTCCAATTCATCTTTGGC 9990 | | | ||||| | ||| ||||| || || | ||| | | ||| || ||||| Sbjct 1335481 A--ACTTTTCAGGGTTCTTCAGAAACTCGACGACTTCCTGGAGTTCCTCCTTGGC 1335429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260231320720