Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769295.1_202014-10-10] 78 sequences; 43,168,069 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq2 93.3 4e-14 >seq2 Length=4137638 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 ||||| || || || ||| || || || || || || | ||| |||||| |||| || Sbjct 2555957 ACCAAGTGCAGAGTTGACTCCTTCTGAATGTTGTAGTCAGAAAGGGTTCGTCCGTCCTCT 2555898 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 || || ||||| || || ||||| ||||| ||||| | || | | ||| |||||| | Sbjct 2555897 AGTTGCTTGCCAGCGAAGATAAGTCGCTGTTGGTCAGGAGGAATACCCTCCTTGTCCTGG 2555838 Query 39196 ATTTTCTGTTTGAGCGTCGCC-ACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 || ||| |||| ||| | | | || || ||||| || |||| ||||| |||| Sbjct 2555837 ATCTTCGACTTGA-CGTTGTCGATGGTGTCAGATGACTCGACTTCCAATGTGATGGTTTT 2555779 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 ||| || || || || || ||||||||||| Sbjct 2555778 TCCGGTAAGGGTCTTGACGAAGATTTGCAT 2555749 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429545191663214