Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769295.1_202014-10-10] 78 sequences; 43,168,069 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq33 93.3 6e-14 >seq33 Length=5643559 Score = 93.3 bits (102), Expect = 6e-14 Identities = 334/518 (64%), Gaps = 12/518 (2%) Strand=Plus/Minus Query 48183 TCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCG 48242 ||||| || || || | ||||||||| || ||||| || |||||||| || || | || Sbjct 146592 TCGTTGGAGAAGGTCAAACCGGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCA 146533 Query 48243 AAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAA 48302 || | || ||||| || || || || || || || || || | | | | Sbjct 146532 AAGGCACCGCTGAAGAAGATACCCTCGACAGCAGCGAAGGCAACCAGACGTTGGGCAAAG 146473 Query 48303 CTGGCTTCGTTGT---GTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGC 48359 | | || |||| | ||||| || ||||| ||||||||||| | || || Sbjct 146472 GTAGAGTCCTTGTCCTGGATCCATCGAATGGCCCAGTCAGCCTTCTTTCGGATGCAGGGA 146413 Query 48360 ATTGTTTCTATAGCATTAAAGAGAAAGttttttt---CATTGCTATCTTTAACGTAAGTA 48416 || || || | ||| || ||||| || || | || ||| | || | ||| || Sbjct 146412 ATGGTATCAACAGCGTTGAAGAGGTAGGTTCGCTGGGCAG-GCT--CCTTGATGTAGGTG 146356 Query 48417 TCTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAA 48476 || || | || ||| | |||||||||||||| || || || || |||||||| Sbjct 146355 TCAATGAGCAGGGAATAGGTCTCGGAGTGAATATTCTCCATCATGATTTGGAATCCGTAG 146296 Query 48477 AAACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTT 48536 || |||| || || | |||||| ||||| | ||||| ||| | | ||||| || Sbjct 146295 AAGCATCGAGCCTCAGGGATCTGGACCTCGCCGCTGAATCGCTCAACGAGGTTCTCGTTG 146236 Query 48537 ACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTG 48596 || || |||||| |||||| || || || | | || || || | | |||| Sbjct 146235 ACAATGCCATCAGAAGCAGCGAAGAAGGCAAGGATGTGAGAGATGAAGAACTGCTCGTCA 146176 Query 48597 GAAGTCA---GTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTC 48653 | |||| | || ||||| || | || ||| || || | ||| | || || || ||| Sbjct 146175 GTGGTCAGACGGTTGTTCCAATCGTGGAGATCCTTGGAGAGATCAATCTCCTCGGCAGTC 146116 Query 48654 CAAAATGATGCCTCTGCTTTTTTATACATATTCCATAT 48691 || || || ||||| || || || ||||| | ||| || Sbjct 146115 CAGAAAGAAGCCTCGGCCTTCTTGTACATTTGCCAGAT 146078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668122697920