Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769305.1_202014-10-10] 105 sequences; 42,707,783 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq20 159 5e-34 >seq20 Length=4904830 Score = 159 bits (176), Expect = 5e-34 Identities = 632/982 (64%), Gaps = 28/982 (3%) Strand=Plus/Plus Query 65736 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 65795 |||| || || || || ||||| || ||||||| || | || | || |||||| Sbjct 1799311 GCAAGGGAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGCACAGTACTCGATGATCTCA 1799370 Query 65796 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 65855 ||||| |||||| | |||||| || | || | || || ||||| |||||| Sbjct 1799371 GTGCACAGATTAGAGCTTCGGATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTACAG 1799430 Query 65856 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 65915 |||||||| ||||| ||||| || | || || || |||| | || | || || | | Sbjct 1799431 GCATCCTTGTAAAGCATGAAGGGGTTTCCGGTCTCGGTCTGGGCCTCGAGGATGGCATAC 1799490 Query 65916 CAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCTT---TTCTCTTTCGTA--TAGT 65969 || | | || | ||||| || || ||| | ||| ||| || ||||| | Sbjct 1799491 CAAA-GCTTCTGGGCCTTGATG---GACTTGCGACCCTTACCTTCCCTCTCGTACTTCTC 1799546 Query 65970 GTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGA 66029 ||| | | || ||||| || || | | | | | ||||| || || | || Sbjct 1799547 GTAGAGGGCC--TCAAACTCTTCACCGTAGCAGTCGGCAAGACCAGGGCACTCGTTGGGG 1799604 Query 66030 CACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAA 66089 ||||| | | ||||||||||| | || || || ||||| || || ||||| ||||| Sbjct 1799605 CACATGAGGGTCCACTCTCCGTTCTTCTCAACACGCTTCATGAAAAGGTCAGGGATCCAG 1799664 Query 66090 AGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCG 66149 || || | || | || | || | ||||| || || |||||| ||||| Sbjct 1799665 AGGGCCAGGAACAGGTCGCGGGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCA 1799724 Query 66150 AGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGT 66209 |||||| | | | |||| ||||| || || | ||| || || | | | ||||| || Sbjct 1799725 AGGAACTCAAAGACATCAGCGTGCCAAGGCTCAAGGTAGATAGCAAAAGCACCAGGTCGC 1799784 Query 66210 TTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATA 66269 ||||| || |||||||| | ||| | || ||||| || | || | | ||| |||| | Sbjct 1799785 TTGTTACCACCCTGATCAACGTAGCGGGCAGTGTTGTTGAAGACACGTAGCATAGGAACA 1799844 Query 66270 ATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAAT--ATTAC 66327 | ||| ||||||||||| ||||| || | || ||| ||| | ||||| || | Sbjct 1799845 ACACCGTTGGATGTACCGTTGGTACCAGCAATGTAGGAGCCAGTGGCACGGATTCGGTGG 1799904 Query 66328 TAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTAT 66387 |||| ||||| || || || ||||| || || || | || || || | |||| Sbjct 1799905 GCATTG--AGACCAATACCACCAGCCATCTTGGAAATCATGGCACAGGTCTTGAGGGTAT 1799962 Query 66388 CATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGT 66447 ||||||| || || || || || ||| |||| | || | || || || | ||| Sbjct 1799963 CATAGATACCGTCAATGCTGTCCTCCTTCATATCAACCAAGAAGCATGAGGAAAGCTGGG 1800022 Query 66448 GACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAA 66507 | || || || || || || | ||| || ||||| || || || | || || | Sbjct 1800023 GTTGAGGGGTACCAGCGTTGAAGAGGGTGGGGGAAGCATGGGTGAAGAACTTGCTGGACA 1800082 Query 66508 GTAGATTGTACGTCT-CAATA---GCTGAGTCT-AT-ATCCCATTGATGAATTCCTACTG 66561 || ||||| |||| ||| | ||| | | | || | ||||| || || | | Sbjct 1800083 TAAGGTTGTATGTCTCCAAGACACGCTCAATATCATCACCCCAT------ATACCAATAG 1800136 Query 66562 CGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGT 66621 |||||||| | |||||||||||| | ||| || |||||| || || || | | || Sbjct 1800137 ACACACGCATGATCATGTGCTGAGGACGTTCGACAATCTTGCCGTCAATCTTGAGGAGGT 1800196 Query 66622 AGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAA 66681 | ||| ||||| || || || ||||| || | |||| || || || ||||| | || Sbjct 1800197 ATGATCGCTCCAACGTCTTGAAGCCAAAGTATTGGTATTGGAAATCACGGTCGTAGACAA 1800256 Query 66682 TAACCGAGTTGAGTTTATCCTT 66703 | | |||| || | ||||| Sbjct 1800257 TGGCGGAGTCTAGCTCTTCCTT 1800278 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658171936148200