Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769305.1_202014-10-10] 105 sequences; 42,707,783 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq20 161 1e-34 >seq20 Length=4904830 Score = 161 bits (178), Expect = 1e-34 Identities = 628/969 (65%), Gaps = 36/969 (4%) Strand=Plus/Plus Query 71694 CAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCA---TATTGTAT 71750 || ||||| || || || || ||||| || ||||||| || |||| || | || Sbjct 1799307 CAGGGCAAGGGAGGCAAGGTTGCAAACAGCGACCTCATCAGG---GGCACAGTACTCGAT 1799363 Query 71751 AATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTT 71810 || |||||||| |||||| | |||||| || | || | || || ||||| Sbjct 1799364 GATCTCAGTGCACAGATTAGAGCTTCGGATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCG 1799423 Query 71811 GTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAAT 71870 |||||| |||||||| ||||| || || || | || || || |||| | || | || Sbjct 1799424 GTTACAGGCATCCTTGTAAAGCATGAAGGGGTTTCCGGTCTCGGTCTGGGCCTCGAGGAT 1799483 Query 71871 CGCTTTCCAGACGACTC-GAGCCTTTATTATATTCTTGTATCTCTT---TTCTCTTTCGT 71926 || | ||| | | || | ||||| || |||| | ||| ||| || |||| Sbjct 1799484 GGCATACCAAA-GCTTCTGGGCCTTGATGGA---CTTGCGACCCTTACCTTCCCTCTCGT 1799539 Query 71927 A-TTGT-GTATATAATCGTTCGAACTCGTCTCCCCAAGCATT-GTCTAATCCAGGACATT 71983 | || | ||| | | || ||||| || || | ||| | | | | ||||| || | Sbjct 1799540 ACTTCTCGTAGAGGGCC--TCAAACTCTTCACCGTA-GCAGTCGGCAAGACCAGGGCACT 1799596 Query 71984 CATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAG 72043 | || || ||||| | | ||||||||| | | | || || ||||| || || |||| Sbjct 1799597 CGTTGGGGCACATGAGGGTCCACTCTCCGTTCTTCTCAACACGCTTCATGAAAAGGTCAG 1799656 Query 72044 GAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTT 72103 | ||||| || || | || || || | || | |||||| || || |||||| Sbjct 1799657 GGATCCAGAGGGCCAGGAACAGGTCGCGGGCGCGGACCTCCTCCTTACCGTGGTTCTTTC 1799716 Query 72104 TAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTC 72163 ||||| |||||| | | | ||||| ||||| || || | ||| || || | | | | Sbjct 1799717 GGAGATCAAGGAACTCAAAGACATCAGCGTGCCAAGGCTCAAGGTAGATAGCAAAAGCAC 1799776 Query 72164 CCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACA 72223 | || || ||||| || |||||||| | ||| | || ||||| || | || | | || Sbjct 1799777 CAGGTCGCTTGTTACCACCCTGATCAACGTAGCGGGCAGTGTTGTTGAAGACACGTAGCA 1799836 Query 72224 TTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAA 72283 | |||| || ||| ||||||| ||| ||||| || | || ||| ||| ||||||| | Sbjct 1799837 TAGGAACAACACCGTTGGATGTACCGTTGGTACCAGCAATGTAGGAGCCAGTGGCACGGA 1799896 Query 72284 TAT--TGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTT 72341 | || ||||| |||| || || || ||||| || || || | || || || Sbjct 1799897 TTCGGTGGGCATTGA--GACCAATACCACCAGCCATCTTGGAAATCATGGCACAGGTCTT 1799954 Query 72342 TAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGA 72401 | ||||||||||| || || || || || ||| |||| | || | || || || Sbjct 1799955 GAGGGTATCATAGATACCGTCAATGCTGTCCTCCTTCATATCAACCAAGAAGCATGAGGA 1800014 Query 72402 CATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTT 72461 | ||| | || || || || || || | ||| || ||||| || || || | || Sbjct 1800015 AAGCTGGGGTTGAGGGGTACCAGCGTTGAAGAGGGTGGGGGAAGCATGGGTGAAGAACTT 1800074 Query 72462 TTCAGACAGTAGATTGTACGTCT-CAATA---GCTGATTCT-AT-ATCCCATTGATGTAT 72515 |||| || ||||| |||| ||| | ||| | | | || | |||| ||| Sbjct 1800075 GCTGGACATAAGGTTGTATGTCTCCAAGACACGCTCAATATCATCACCCCA------TAT 1800128 Query 72516 TCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTT 72575 || | | |||||||| | ||| |||||||| | ||| || |||||| | || || Sbjct 1800129 ACCAATAGACACACGCATGATCATGTGCTGAGGACGTTCGACAATCTTGCCGTCAATCTT 1800188 Query 72576 CAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTC 72635 | | ||| ||| ||||| || || || ||||| || | |||| || || || || Sbjct 1800189 GAGGAGGTATGATCGCTCCAACGTCTTGAAGCCAAAGTATTGGTATTGGAAATCACGGTC 1800248 Query 72636 GTAAATAAT 72644 ||| | ||| Sbjct 1800249 GTAGACAAT 1800257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671138319129800