Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769305.1_202014-10-10] 105 sequences; 42,707,783 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq14 289 4e-73 seq20 145 1e-29 >seq14 Length=1508566 Score = 289 bits (320), Expect = 4e-73 Identities = 589/850 (69%), Gaps = 35/850 (4%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| |||||||||| ||||| |||| || || ||||| | ||| ||| | ||||| Sbjct 135070 ATCTGGCAAATGTACAAGAAGGCCGAGGCTTCTTTCTGGACTGCCGAGGAGATTGATCTC 135129 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAG-AGTTT---AT 125134 |||||||| || |||||||| | | ||| |||| ||||| |||| |||| || Sbjct 135130 TCCAAGGATCTCCACGATTGGAACAACCGTCTGACC---ACTGA-CGAGCAGTTCTTCAT 135185 Query 125135 ATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGA 125193 || ||||| | |||||||| || | || ||||| || |||||||| || || ||||| Sbjct 135186 CTCTCACATCCTTGCCTTCTTCGCTGCTTCTGATGGCATTGTCAACGAGAACCTCGTTGA 135245 Query 125194 CACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATC 125252 |||||| ||| | || || |||| ||| ||||| ||||||||||||||| Sbjct 135246 G-CGATTCAGCGGCGAGGTCCAGATCCCTGAGGC-TCGATGCTTCTACGGATTCCAAATC 135303 Query 125253 ATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGAT 125312 ||||| ||||| | ||||| || | || || || ||||||| ||||| || Sbjct 135304 ATGATGGAGAATATTCACTCCGAGACCTATTCCCTGCTCATTGACACCTACATCAAGGAG 135363 Query 125313 CC-GCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAA 125371 || || | ||| | ||||| ||||| | || || | || | || || || || Sbjct 135364 CCTGCCCAGCGAACCTAC-CTCTTCAACGCTGTTGATACCATTCCCTGCATCCGAAAGAA 135422 Query 125372 GGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGT 125431 |||| | |||| ||||| |||||| | ||| | | ||| | | ||| | | ||||| Sbjct 135423 GGCTGACTGGGCCATTCGATGGATCCAGGACAAGGACTCTACCTTTGCCCAACGTCTGGT 135482 Query 125432 GGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCT 125491 || ||||| || || ||||| |||||||| ||| ||||| ||||||| ||||| Sbjct 135483 TGCCTTCGCTGCTGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCTGGCT 135542 Query 125492 CAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGA 125551 ||||||||| || ||||||||||| |||| | |||||| | || ||||| ||||| Sbjct 135543 CAAGAAGCGTGGCCTCATGCCCGGTTTGACCTTCTCCAACGAGCTCATCTCTCGTGACGA 135602 Query 125552 GGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCT-GCGTCCCGAGTGCA 125610 |||||| ||| ||||||||| | | || ||| | | |||| | || |||| Sbjct 135603 GGGCCTTCACACCGACTTTGCC-TGC--CTTCTTCACTCCCATCTCAAGGGCC--GTGC- 135656 Query 125611 GATCCAGC-GATGA-AAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGA 125668 | | ||| ||||| ||| ||||| |||| |||||||| | || || || || Sbjct 135657 TAGCAAGCAGATGATCCAGGACATCA--TTTGT----GATGCCGTCACCATTGAGCAGGA 135710 Query 125669 GTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGA 125728 ||| || || || | || || | || |||||||||||| ||| || ||| | Sbjct 135711 GTTCCTCACTGAGGCTCTCCCCTGTGCCCTGCTTGGCATGAACTCCAACCTGATGAAGCA 135770 Query 125729 GTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGC--CG-CAAGATTTA 125785 |||||| |||||||| || || |||||||| || | ||| || ||| |||| Sbjct 135771 GTACATTGAGTTTGTCGCTGACCGTCTACT---CGTCGCTCTCGGCAACGAGAAGGTTTA 135827 Query 125786 CAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTT 125845 ||| |||| || ||||| || |||||| | ||| || || | || ||||||||||| Sbjct 135828 CAAGGCCACAAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGTGGCAAGACCAACTT 135887 Query 125846 TTTCGAGAAG 125855 ||||||||| Sbjct 135888 CTTCGAGAAG 135897 >seq20 Length=4904830 Score = 145 bits (160), Expect = 1e-29 Identities = 312/463 (67%), Gaps = 14/463 (3%) Strand=Plus/Minus Query 96864 CGATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCT 96923 || |||||| ||||| || || || || || || ||| | || ||||| | || ||| Sbjct 1799810 CGCTACGTTGATCAGGGTGGTAACAAGCGACCTGGTGCTTTTGCTATCTACCTTGAGCCT 1799751 Query 96924 TGGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCA 96983 |||||||| || || ||||| || | || | || || ||| || || |||| Sbjct 1799750 TGGCACGCTGATGTCTTTGAGTTCCTTGATCTCCGAAAGAACCACGGTAAGGAGGAGGTC 1799691 Query 96984 CGAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTC--- 97040 || ||| | ||| |||| || |||||| | || || | ||||||||||| || Sbjct 1799690 CGCGCCCGCGACCTGTTCCTGGCCCTCTGGATCCCTGACCTTTTCATGAAGCGTGTTGAG 1799631 Query 97041 AACGACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGC 97100 || |||| | | |||| ||| ||||||||| || || || ||||| |||| ||| Sbjct 1799630 AAGAACGGAG---AGTGGACCCTCATGTGCCCCAACGAGTGCCCTGGTCTTGCCGACTGC 1799574 Query 97101 TGGGGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTGAGA 97160 | || ||||||||||||||| ||| | |||||| |||| | || | | Sbjct 1799573 TACGGTGAAGAGTTTGAGGCCCTCTACGAGAAGTACGAG----AGGGAAGGTAAGGGTCG 1799518 Query 97161 CGAGTCGATGCACG---AGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGG 97216 | |||| || | | |||| || ||| | |||||| | ||| ||| ||||| || Sbjct 1799517 CAAGTCCATCAAGGCCCAGAAGCTTTGGTATGCCATCCTCGAGGCCCAGACCGAGACCGG 1799458 Query 97217 AACTCCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGG 97276 || || | ||| || ||||||||| || || ||||| |||||||| || | || Sbjct 1799457 AAACCCCTTCATGCTTTACAAGGATGCCTGTAACCGCAAGAGCAACCAGAAGAACCTCGG 1799398 Query 97277 CACCATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTAC 97319 ||||||| |||| ||||||||||| || || | |||||| Sbjct 1799397 CACCATCCGAAGCTCTAATCTGTGCACTGAGATCATCGAGTAC 1799355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058227359800