Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769305.1_202014-10-10] 105 sequences; 42,707,783 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq1 102 7e-17 >seq1 Length=1290987 Score = 102 bits (112), Expect = 7e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870 ||||| ||||| || | || || ||||||| |||| ||||||||||| || || Sbjct 575421 GTAGACTCCTTCTGGATATTGTAGTCGCTCAAAGTGCGACCGTCCTCCAGCTGCTTACCA 575362 Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930 | ||||| | | ||||| || || |||||||| || ||||| | ||| || ||| Sbjct 575361 GCGAAGATAAGACGCTGCTGGTCAGGGGGAATACCCTCCTTGTCTTGAATCTTGCTCTTC 575302 Query 94931 ACGGCGCCGACAGTGTCAGCGTG-GTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGT 94989 ||| | | | |||||| || || ||||| |||| ||||| || |||||||| ||||| Sbjct 575301 ACGTTGTCAATAGTGTC-GCTTGATTCGACCTCAAGGGTGATAGTCTTTCCAGTGAGAGT 575243 Query 94990 TTTCACAAAGATCTGCAT 95007 || || || |||||||| Sbjct 575242 CTTGACGAAAATCTGCAT 575225 Score = 100 bits (110), Expect = 3e-16 Identities = 150/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA--TCCT 94856 |||||||||| ||| || ||||| || | ||| || || | || ||| | |||| Sbjct 575205 ACCAAGTGCAGAGTTGACTCCTTCTGAATGTTGTAGTCAG--AAAGGGTTCGTCCGTCCT 575148 Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 | || || || || | ||||| | || || || || ||||||||||| || ||||| | Sbjct 575147 CTAGTTGCTTGCCAGCGAAGATAAGTCGCTGTTGGTCAGGAGGAATACCCTCCTTGTCCT 575088 Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976 || || | ||||||| | ||| ||||||| ||||| || | |||||||||| Sbjct 575087 GGATCTTCGACTTGACGTTGTCGATGGTGTCAGATGACTCGACTTCCAATGTGATGGTTT 575028 Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||| ||||| || || || ||||| ||||| Sbjct 575027 TTCCGGTAAGGGTCTTGACGAAGATTTGCAT 574997 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448290611617800