Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769305.1_202014-10-10] 105 sequences; 42,707,783 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq20 369 1e-96 >seq20 Length=4904830 Score = 369 bits (408), Expect = 1e-96 Identities = 1172/1786 (66%), Gaps = 52/1786 (3%) Strand=Plus/Minus Query 363400 AAGACGATGGAGAAATCCTACCTATCTCGT-ATCAATGGTGATATTGTTGAACGCCCGCA 363458 |||||| ||||| ||| ||||| ||| || | || | ||||| ||||| || || Sbjct 1800215 AAGACGTTGGAGCGATCATACCTC-CTCAAGATTGACGGCAAGATTGTCGAACGTCCTCA 1800157 Query 363459 GCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCG--GATGTTGATGCCGCGATT 363516 ||| ||| | |||||||| |||||||||| || | | ||| |||| | | Sbjct 1800156 GCACATGATCATGCGTGTGTCTATTGGTAT--ATGGGGTGATGATATTGAGCGTGTCTTG 1800099 Query 363517 GAAACATATAAGCTTCTAAGT---GCTCGTGTATTCACGCACGCCACGCCAACAATGTAC 363573 || ||||| || ||| | || || || | ||||| || || | || || | | | Sbjct 1800098 GAGACATACAACCTTAT--GTCCAGCAAGT-TCTTCACCCATGCTTCCCCCACCCTCTTC 1800042 Query 363574 AATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGAT 363633 || ||||| || | | | || ||| | || || ||||| | | | |||||||| || Sbjct 1800041 AACGCTGGTACCCCTCAACCCCAGCTTTCCTCATGCTTCTTGGTTGATATGAAGGAGGAC 1799982 Query 363634 TCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGC 363693 ||| || ||||||| ||| || || |||| ||||| | |||||||||| || || Sbjct 1799981 AGCATTGACGGTATCTATGATACCCTCAAGACCTGTGCCATGATTTCCAAGATGGCTGGT 1799922 Query 363694 GGAATTGGTGTATCGATCCACAATG--TTCGTGC-ACAGAACAGTTACATTCGCGGCACA 363750 || |||||| | | || | || | | ||||| || | | |||||| || || Sbjct 1799921 GGTATTGGTCT--CAATGCCCACCGAATCCGTGCCACTGG-CTCCTACATTGCTGGTACC 1799865 Query 363751 GGGGGATAC-TCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTA 363809 || ||| || || || | ||||| ||||| ||||| || |||| ||||| | || Sbjct 1799864 AACGG-TACATCCAACGGTGTTGTTCCTATGCTACGTGTCTTCAACAACACTGCCCGCTA 1799806 Query 363810 CGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCA 363869 ||| || |||||||| ||||| || || |||||||| || || |||||| || Sbjct 1799805 CGTTGATCAGGGTGGTAACAAGCGACCTGGTGCTTTTGCTATCTACCTTGAGCCTTGGCA 1799746 Query 363870 TGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGC 363929 || ||| | |||||||| ||||| ||||| || ||| || || ||||| | || || Sbjct 1799745 CGCTGATGTCTTTGAGTTCCTTGATCTCCGAAAGAACCACGGTAAGGAGGAGGTCCGCGC 1799686 Query 363930 ACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGG 363989 || || |||||| || || ||| | |||||| ||| |||||||| || ||| || Sbjct 1799685 CCGCGACCTGTTCCTGGCCCTCTGGATCCCTGACCTTTTCATGAAGCGTGTTGAGA-AGA 1799627 Query 363990 TAAGA-ATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTG 364048 || | ||| | ||| | ||||| |||| || || |||||| |||| | |||| Sbjct 1799626 ACGGAGAGTGGACCCTCATGTGCCCCAACGAGTGCCCTGGTCTTGCCGACTGCTACGGTG 1799567 Query 364049 ACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAATTC 364108 | || | || || || ||||| ||||| || ||| || |||| ||| ||| | || Sbjct 1799566 AAGAGTTTGAGGCCCTCTACGAGAAGTACGAGAGGGAAGGTAAGGGTCGCAAGTCCATCA 1799507 Query 364109 CCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATA 364168 || |||||||| |||| ||||||| | || | |||| ||||| |||| |||| | Sbjct 1799506 AGGCCCAGAAGCTTTGGTATGCCATCCTCGAGGCCCAGACCGAGACCGGAAACCCCTTCA 1799447 Query 364169 TGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGC 364228 || | ||||| ||| | || ||||||||| ||||||| || |||| || || || | | Sbjct 1799446 TGCTTTACAAGGATGCCTGTAACCGCAAGAGCAACCAGAAGAACCTCGGCACCATCC-GA 1799388 Query 364229 AGAGC-AACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGT 364287 || | || || || || ||||| || || ||| || || || ||| || || || Sbjct 1799387 AGCTCTAATCTGTGCACTGAGATCATCGAGTACTGTGCCCCTGATGAGGTCGCTGTTTGC 1799328 Query 364288 AACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAAGATGGTA---CTTT---TGACCAC 364341 |||||||| || | || || || || || | || ||| | ||| ||| | Sbjct 1799327 AACCTTGCCTCCCTTGCCCTGCCTGCTTTCATCAACTATGATGAGGCTTGCTATGATTTC 1799268 Query 364342 CAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGACAAG 364401 || | || || | || | | || | |||| | ||||| | ||||| Sbjct 1799267 AAGAAGCTGCATCAGGTCAGTCAGGTTGTTGTCCGCAACTTGAACAAGATCATCGATGTC 1799208 Query 364402 AATTATTATCCAATTCCTGAAGC-CG----AGCGTTCTAATATGCGTCATCGCCCGATTG 364456 || | || || | | || || || ||| || |||||||| || || || | Sbjct 1799207 AACCACTACCCTGTGCAAGAGGCTCGCAACAGC-----AACATGCGTCACCGACCTATCG 1799153 Query 364457 GTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAG--ATGGCATTTGATTC 364514 |||||||||||||||| || ||||| | ||| | ||||| ||| | || || || Sbjct 1799152 GTCTTGGTGTACAGGGTCTTGCTGATGCTTTCCT--TGCTCTGCGCATGCCCTTCGAGTC 1799095 Query 364515 GCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGAC 364574 || || ||| | | || || ||| |||||||||| || || || || || | || Sbjct 1799094 TCCAGAGGCTAGAGAGCTCAACAAGCAGATCTTTGAGACCATCTACCACGCTGCCCTCAC 1799035 Query 364575 TGCTTCGTGTG-ATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTC 364633 ||| || ||| | ||||| || |||| |||||||| | |||| || || Sbjct 1799034 TGCCTCC-GTGCAGTTGGCCAAGGAGGAGGGTCCCTACTCTACCTTCAAGGGTTCTCCCG 1798976 Query 364634 TTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACT 364693 || |||| | ||||||| || | ||||| |||| ||| || | || ||| ||| Sbjct 1798975 CCTCTGAGGGTATCCTCCAGTTCGACATGTGGAACGTCAAGCCTTCCGACCTTTGGGACT 1798916 Query 364694 GGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAAC--TCC-CTCGTTACAG 364750 |||| | || || | ||||||| || |||| || ||| || ||| || | Sbjct 1798915 GGGAGAGCCTTCGAGAGGATGTTAAGACTCACGGTATCCGTAACAGTCTGCTCCTT---G 1798859 Query 364751 CGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGT 364810 | || ||||| || || ||| | ||||| || || ||||||||||||||||| || | Sbjct 1798858 CCCCTATGCCTACTGCCAGTACCTCGCAGATTCTGGGTAACAACGAGTGCTTCGAGCCTT 1798799 Query 364811 TTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGT 364870 || ||| |||| ||||| || ||| | || || || | ||| || || | Sbjct 1798798 ACACCTCCAACATTTACCAGCGCCGAGTCCTTGCTGGTGAGTTCCAGGTTGTCAACCCCT 1798739 Query 364871 ACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCA 364930 | ||||||||||| |||| || ||||| ||| |||||||||| ||| | Sbjct 1798738 GGTTGCTCAAGGATCTTGTCGACATGGGCTTGTGGTCTGATGCCATGAAGAACCGTATTA 1798679 Query 364931 TCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTT 364990 | ||| ||| |||||| | |||||||| || | || | || | ||| || ||| Sbjct 1798678 TTTCCGATAACGGTTCTATTCAGAACATCCCCAACATCCCTGCCGACGTCAAGGCTCTTT 1798619 Query 364991 ACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTG 365050 |||| || || ||||| ||||| ||| | | | ||||| ||||| || |||| Sbjct 1798618 ACAAGACTGTTTGGGAGATTTCTCAGCGCCAGGTTGTCCAGATGGCTGCCGACCGAGGTG 1798559 Query 365051 CTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAGC 365110 |||| ||| |||| |||||| | ||| | ||||| | || || | |||| Sbjct 1798558 CTTTCATCGATCAGTCCCAGTCCCTCAACATTCACATGAAGGATCCCACGATGGGCAAGA 1798499 Query 365111 TTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 | || |||||| ||| ||| ||||| ||||| ||||| || Sbjct 1798498 TCACCAGCATGCACTTCGCCGGCTGGAAGCTTGGTCTCAAGACTGG 1798453 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303351846582110