Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769305.1_202014-10-10] 105 sequences; 42,707,783 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq14 174 2e-38 >seq14 Length=1508566 Score = 174 bits (192), Expect = 2e-38 Identities = 377/559 (67%), Gaps = 5/559 (1%) Strand=Plus/Minus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150 ||| ||||||||||| || | || ||||| || || || | ||| ||| ||| || || Sbjct 135627 GCAGGCAAAGTCGGTGTGAAGGCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAA 135568 Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210 ||| || | || || || ||||||||||| || || || ||||| ||| || || Sbjct 135567 ACCGGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAA 135508 Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCT 93270 ||||| || || || || || || || | ||||| |||||| | | | || | || Sbjct 135507 GATACCCTCGACAGCAGCGAAGGCAACCAGACGTTGGGCAAAGGTAGAGTCCTTG-TCCT 135449 Query 93271 G-ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGT 93329 | |||||| | ||||| || || || || || || || | || || | ||||| Sbjct 135448 GGATCCATCGAATGGCCCAGTCAGCCTTCTTTCGGATGCAGGGAATGGTATCAACAGCGT 135389 Query 93330 TAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACA 93389 | || ||||| ||||| | | | || ||||| || || || | ||| ||||| Sbjct 135388 TGAAGAGGTAGGTTCGCTGGGCAGGCTCCTTGATGTAGGTGTCAATGAGCAGGGAATAGG 135329 Query 93390 TTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGA 93449 | || || || | ||||||||| ||||||||||||||||| |||| ||| || | || Sbjct 135328 TCTCGGAGTGAATATTCTCCATCATGATTTGGAATCCGTAGAAGCATCGAGCCTCAGGGA 135269 Query 93450 TCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTG 93509 |||| || || |||| ||| ||||| || || ||||| || ||||| || || | Sbjct 135268 TCTGGACCTCGCCGCTGAATCGCTCAACGAGGTTCTCGTTGACAATGCCATCAGAAGCAG 135209 Query 93510 CaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCA-TCTT--TAAGCTTATCCC 93566 | || || || | || || || || | ||| ||| | | | | || | || Sbjct 135208 CGAAGAAGGCAAGGATGTGAGAGATGAAGAACTGCTCGTCAGTGGTCAGACGGTTGTTCC 135149 Query 93567 AATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTT 93626 ||||| ||||| || || ||||| | || ||| ||||||| || || || || || | Sbjct 135148 AATCGTGGAGATCCTTGGAGAGATCAATCTCCTCGGCAGTCCAGAAAGAAGCCTCGGCCT 135089 Query 93627 TTTTGTACATATCCCATAT 93645 | |||||||| | ||| || Sbjct 135088 TCTTGTACATTTGCCAGAT 135070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860069120200