Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769305.1_202014-10-10] 105 sequences; 42,707,783 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq20 241 1e-58 >seq20 Length=4904830 Score = 241 bits (266), Expect = 1e-58 Identities = 1059/1664 (64%), Gaps = 28/1664 (2%) Strand=Plus/Minus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||| | ||||||| |||||| || ||||| || |||||||||||||| || |||| | Sbjct 1800233 TACCAATACTTTGGCTTCAAGACGTTGGAGCGATCATACCTCCTCAAGATTGACGGCAAG 1800174 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 || ||| || || || || || | ||||| || | || || || || | || Sbjct 1800173 ATTGTCGAACGTCCTCAGCACATGATCATGCGTGTGTCTATTGGTATATGGGGTGATGAT 1800114 Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCCACC 93897 || | ||| ||| | | | || ||| |||| | ||| || || Sbjct 1800113 ATTGAGCGTGTCTTGGAGACATACAACCTTATGTCCAGCAAGTTCTTCACCCATGCTTCC 1800054 Query 93898 CCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACG 93957 || ||||| |||||||| || ||||| || ||| | || || || ||| || | Sbjct 1800053 CCCACCCTCTTCAACGCTGGTACCCCTCAACCCCAGCTTTCCTCATGCTTCTTGGTTGAT 1799994 Query 93958 AACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCA 94017 | |||| ||| ||| ||| || | || | ||||||| |||||| | || || Sbjct 1799993 ATGAAGGAGGACAGCATTGACGGTATCTATGATACCCTCAAGACCTGTGCCATGATTTCC 1799934 Query 94018 AAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATC 94077 || || || || || || ||| || |||| | ||||||| || |||||||| Sbjct 1799933 AAGATGGCTGGTGGTATTGGTCTCAATGCCCACCGAATCCGTGCCACTGGCTCCTACATT 1799874 Query 94078 CGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCG 94137 |||||||| || || |||||||| | || |||||||| || |||||||||||| | Sbjct 1799873 GCTGGTACCAACGGTACATCCAACGGTGTTGTTCCTATGCTACGTGTCTTCAACAACACT 1799814 Query 94138 GCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAG 94197 || |||||||| || ||||||||| | | | ||| |||| || |||| || ||| Sbjct 1799813 GCCCGCTACGTTGATCAGGGTGGTAACAAGCGACCTGGTGCTTTTGCTATCTACCTTGAG 1799754 Query 94198 CCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTG 94257 || |||||||| || || | ||| | || || |||||||||||||| || || | Sbjct 1799753 CCTTGGCACGCTGATGTCTTTGAGTTCCTTGATCTCCGAAAGAACCACGGTAAGGAGGAG 1799694 Query 94258 GAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTC 94317 | | ||| | ||||| ||| || |||||| | || |||||||| ||||| || || Sbjct 1799693 GTCCGCGCCCGCGACCTGTTCCTGGCCCTCTGGATCCCTGACCTTTTCATGAAGCGTGTT 1799634 Query 94318 GAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGAC-GT 94376 ||||| ||| | |||| || | || ||||| || || || || || ||||| | Sbjct 1799633 GAGAAGAACGGAGAGTGGACCCTCATGTGCCCCAACGAGTGCCCTGGTCTTGCCGACTGC 1799574 Query 94377 T--TGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAGG 94434 | ||| | | ||||| | | | || | ||||| | | || |||| | Sbjct 1799573 TACGGTGAAGAG---TTTGAGGCCCTCTACGAGAAGTACGAGAGGGAAGGTAAGGGTCGC 1799517 Query 94435 AAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGT 94494 ||| || | || |||||| ||| || ||| | || | ||| ||||| || Sbjct 1799516 AAGTCCATCAAGGCCCAGAAGCTTTGGTATGCCATCCTCGAGGCCCAGACCGAGACCGGA 1799457 Query 94495 ACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGG 94553 | |||| ||| | | |||||| |||| ||| |||| ||||||| || ||||||| Sbjct 1799456 AACCCCTTCATGCTTTACAAGGATGCCTGT-AACCGCAAGAGCAACCAGAAGAACCTCGG 1799398 Query 94554 GGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGAT 94613 ||| ||||| ||||||||||| ||||| ||||||| | | || || ||| | Sbjct 1799397 CACCATCCGAAGCTCTAATCTGTGCACTGAGATCATCGAGTACTGTGCCCCTGATGAGGT 1799338 Query 94614 TGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACACGTC 94673 ||||| || ||||| | |||| | |||| | ||||| | | || Sbjct 1799337 CGCTGTTTGCAACCTTGCCTCCCTTGCCCTGCCTGCTTTCAT---------CAACTATGA 1799287 Query 94674 TACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATG--GTCTTGAAC 94731 | |||| | ||| | || |||| | | | | ||| || ||| ||| Sbjct 1799286 TGAGGCTTGCTATGATTTCAAGAAGCT--GCATCAGGTCAGTCAGGTTGTTGTCCGCAAC 1799229 Query 94732 CTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTG 94791 |||||| | | ||||| ||| |||||| || | ||||| ||| ||| || Sbjct 1799228 TTGAACAAGATCATCGATGTCAACCACTACCCTGTGCAAGAGGCTCGCAACAGCAACATG 1799169 Query 94792 AAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGCGT 94851 || || || ||||| | || || |||||| | || || || | | |||| Sbjct 1799168 CGTCACCGACCTATCGGTCTTGGTGTACAGGGTCTTGCTGATGCTTTCCTTGCTCTGCGC 1799109 Query 94852 CTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATTTAT 94911 |||||| ||| ||| || || | | || | | || || || | ||| || Sbjct 1799108 ATGCCCTTCGAGTCTCCAGAGGCTAGAGAGCTCAACAAGCAGATCTTTGAGACCATCTAC 1799049 Query 94912 TACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACGAATCG 94971 ||| ||| | | ||||| || ||||||| ||| | || || || | Sbjct 1799048 CACGCTGCCCTCACTGCCTCCGTGCAGTTGGCCA---AGGAGGAGGGTCCCTACTCTACC 1798992 Query 94972 TTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCCC 95031 ||| || || ||| |||| || | ||||||||| | ||| || ||||| Sbjct 1798991 TTCAAGGGTTCTCCCGCCTCTGAGGGTATCCTCCAGTTCGACATGTGGAACGTCAAGCCT 1798932 Query 95032 TCGGGTCTGTACGACTGGGA-AGCTCTACGCGCTGATGTTATCAAACACGGTGTGAAAAA 95090 || | || | |||||||| ||| || || | ||||||| | |||||| | || Sbjct 1798931 TCCGACCTTTGGGACTGGGAGAGC-CTTCGAGAGGATGTTAAGACTCACGGTATCCGTAA 1798873 Query 95091 CGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGA 95150 | ||||| | ||||| ||||| || ||| || ||||||| || || |||||||| Sbjct 1798872 CAGTCTGCTCCTTGCCCCTATGCCTACTGCCAGTACCTCGCAGATTCTGGGTAACAACGA 1798813 Query 95151 GTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCC 95210 || ||||| || | |||||||||| | ||| | | || || || || || || |||| Sbjct 1798812 GTGCTTCGAGCCTTACACCTCCAACATTTACCAGCGCCGAGTCCTTGCTGGTGAGTTCCA 1798753 Query 95211 CGTCATCAACAAGCACCTCCT-ACGGGACCTGACGTCTCTGGGTGTGTGGGGTGACAAGG 95269 || ||||| | || | || | || || | |||| ||||| ||| Sbjct 1798752 GGTTGTCAACCCCTGGTTGCTCAAGGATCTTGTCGAC-ATGGGCTTGTGGTCTGATGCCA 1798694 Query 95270 TCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAATACCGGAGG 95329 | ||||||| | | || ||||| || | ||||||||||| | || || | | Sbjct 1798693 TGAAGAACCGTATTATTTCCGATAACGGTTCTATTCAGAACATCCCCAACATCCCTGCCG 1798634 Query 95330 ACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGC 95373 || ||||||| || |||||||| || |||||||| | |||||| Sbjct 1798633 ACGTCAAGGCTCTTTACAAGACTGTTTGGGAGATTTCTCAGCGC 1798590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722550675800