Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769305.1_202014-10-10] 105 sequences; 42,707,783 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq1 107 1e-18 >seq1 Length=1290987 Score = 107 bits (118), Expect = 1e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 ||||||||||| || || || || ||||| ||||| | | | | |||| || | || Sbjct 575427 TGAAGGGTAGACTCCTTCTGGATATTGTAGTCGCTCAAAGTGCGACCGTCCTCCAGCTGC 575368 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 || |||||| | || | |||||| ||||| ||||| || |||||||| ||| ||| Sbjct 575367 TTACCAGCGAAGATAAGACGCTGCTGGTCAGGGGGAATACCCTCCTTGTCTTGAATCTTG 575308 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 || || || | || ||||| ||||| ||| || || | ||| || || || || || Sbjct 575307 CTCTTCACGTTGTCAATAGTGTCGCTTGATTCGACCTCAAGGGTGATAGTCTTTCCAGTG 575248 Query 15154 AGAGTTTTTACAAAAATTTGCATA 15177 ||||| || || ||||| |||||| Sbjct 575247 AGAGTCTTGACGAAAATCTGCATA 575224 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032 ||| ||||| || || || || ||||||||||| ||| | | | || || | || Sbjct 574690 ATGGAGGGTGGACTCCTTCTGGATGTTGTAATCAGAGAGGGTGCGGCCATCCTCAAGCTG 574631 Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092 ||||||||| | ||||| ||||| ||||| || || || |||||||| ||| || Sbjct 574630 CTTGCCAGCGAAAATCAATCGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGAATCTT 574571 Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152 | || ||| | || ||||| ||| | || || || | ||| ||||| || || || Sbjct 574570 GGACTTGACATTGTCGATAGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGGT 574511 Query 15153 CAGAGTTTTTACAAAAATTTGCAT 15176 || || || || || |||||||| Sbjct 574510 CAAGGTCTTGACGAAGATTTGCAT 574487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357391542649925