Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769305.1_202014-10-10] 105 sequences; 42,707,783 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq14 163 5e-35 seq20 100 5e-16 >seq14 Length=1508566 Score = 163 bits (180), Expect = 5e-35 Identities = 366/544 (67%), Gaps = 17/544 (3%) Strand=Plus/Minus Query 159628 CTTCTTGTATT--GCGACACATTCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATT 159685 ||||| ||| | ||||||| ||||||||| |||||||||||||| | | ||| || Sbjct 135918 CTTCTGGTAGTCAGCGACACG--CTTCTCGAAGAAGTTGGTCTTGCCACCAAGGGAGATG 135861 Query 159686 GATTCCATGAACCCGAATGGGTTCTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCC 159745 |||||||| |||| ||||| | | | || |||| |||||||| | Sbjct 135860 TTCTCCATGAAGTCGAAGGGGTTTGTGGCCTTGTAAACCTTCTCGTTGCCGAGAGCGACG 135801 Query 159746 AGCAACCTGTCTGCCACAAATTCGATGTAGCTACA-CATCTGCTCACAGTTGATCCCCAG 159804 || | | ||| || ||||| || ||||| || | |||| | | |||| || || || Sbjct 135800 AGTAGACGGTCAGCGACAAACTCAATGTA-CTGCTTCATCAGGTTGGAGTTCATGCCAAG 135742 Query 159805 CAGCCTAACGGGGAGCGCTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCAC 159864 ||| | |||||| || || | || ||||||| |||||| ||| || || | Sbjct 135741 CAGGGCACAGGGGAGAGCCTCAGTGAGGAACTCCTGCTCAATGGTGACGGCATCACAAAT 135682 Query 159865 AATCTGCGAGA----CACGTTCGTACCCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGA 159920 || | | || | || || | |||| || | ||| | || | | Sbjct 135681 GATGTCCTGGATCATCTGCTTGCTAGCACGGC----CCTTGAGATGGGAGTGAA---GAA 135629 Query 159921 GGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGA 159980 |||| ||||||||| ||| || |||||||| |||||||||| ||||||||| | | | | Sbjct 135628 GGCAGGCAAAGTCGGTGTGAAGGCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCA 135569 Query 159981 GGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAA 160040 || ||||||| |||||| |||||||| || |||| ||||| |||||||| || | Sbjct 135568 AACCGGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGA 135509 Query 160041 AGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCAT 160100 |||| ||||| || || || || || || || | | |||| | | || |||| | Sbjct 135508 AGATACCCTCGACAGCAGCGAAGGCAACCAGACGTTGGGCAAAGGTAGAGTCCTTGTCCT 135449 Query 160101 GGGTCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGT 160160 || |||| | ||||||| |||||||||||| |||||| || ||| || || |||| Sbjct 135448 GGATCCATCGAATGGCCCAGTCAGCCTTCTTTCGGATGCAGGGAATGGTATCAACAGCGT 135389 Query 160161 TAAA 160164 | || Sbjct 135388 TGAA 135385 >seq20 Length=4904830 Score = 100 bits (110), Expect = 5e-16 Identities = 442/684 (65%), Gaps = 18/684 (3%) Strand=Plus/Plus Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTT-CTCAGATAGTACATGC 203897 || ||| || |||||||| || | | |||||| |||| | | || |||||||||| Sbjct 1798395 CTGGTCGACAGTGAACTGGATAGGGGCGGCGGCAG-CCTGTGTGCGAAGGTAGTACATGC 1798453 Query 203898 CGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGG 203957 | ||||| || || || ||| ||| | ||||||| | | |||| || ||| Sbjct 1798454 CAGTCTTGAGACCAAGCTTCCAGCCGGCGAAGTGCATGCTGGTGATCTTGCCCATCGTGG 1798513 Query 203958 GGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGG 204017 | || |||||||||||| || |||||| || |||||||||| | || || || | Sbjct 1798514 GATCCTTCATGTGAATGTTGAGGGACTGGGACTGATCGATGAAAGCACCTCGGTCGGCAG 1798573 Query 204018 CCATATTGATAA--TGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGT 204075 |||| | || || ||| ||| ||||||||||| || |||||| | | | || Sbjct 1798574 CCATCTGGACAACCTGG--CGCTGAGAAATCTCCCAAACAGTCTTGTAAAGAGCCTTGAC 1798631 Query 204076 GTGTTGAGGCACATCTTCCCACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTCTCATCC 204134 || ||| | | | | || ||| || || ||||| |||| || | | || Sbjct 1798632 GTCGGCAGGGATGT-TGGGGATGTTCTGAATAGAACCGTTATCGGAAATAATACGGTTCT 1798690 Query 204135 TCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGA 204194 || | | || ||||| ||||| || || ||| | || |||||||| | Sbjct 1798691 TCATGGCATCAGACCACAAGCCCATGTCGACAAGATCCTTGAGCAACCAGGGGTTGACAA 1798750 Query 204195 TCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACG 204254 ||| || || || | || || | || | | | |||| |||| | || ||||| Sbjct 1798751 CCTGGAACTCACCAGCAAGGACTCGGCGCTGGTAAATGTTGGAGGTGTAAGGCTCGAAGC 1798810 Query 204255 CCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGG 204314 ||||||||| || | |||||| | ||| ||||| || ||||| || || |||||||| Sbjct 1798811 ACTCGTTGTTACCCAGAATCTGCGAGGTACTGGCAGTAGGCATAGGGGCAAGGAGCAGAC 1798870 Query 204315 AGTTGCGCACACCGT-ATTTTTGGACCCTGCGCTTCAGAGAGGT-CCAGTCGTGCA--TC 204370 ||| || | ||||| | | || | | | | || | | | |||||| | || Sbjct 1798871 TGTTACGGATACCGTGAGTCTT--AACATCCTCTCGAAGGCTCTCCCAGTCCCAAAGGTC 1798928 Query 204371 GCACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCC 204430 | | || || ||| ||||||||||||||| | ||| || | | | | || ||| Sbjct 1798929 GGA--AGGCTTGACGTTCCACATGTCGAACTGGAGGATACCCTCAGAGGCGGGAGAACCC 1798986 Query 204431 TTGTACGTCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCAC-GAGGCGGCCATGGCGTG 204489 ||| | || | || || ||||| | |||| | ||||| ||||| | | ||| Sbjct 1798987 TTGAAGGTAGAGTAGGGACCCTCCTCCTTGGCCAAC-TGCACGGAGGCAGTGAGGGCAGC 1799045 Query 204490 ATAGTACATGGTCTCAAAGATCTG 204513 | ||| ||||||||||||||||| Sbjct 1799046 GTGGTAGATGGTCTCAAAGATCTG 1799069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795154156358800