Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769305.1_202014-10-10] 105 sequences; 42,707,783 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq20 253 2e-62 seq53 116 4e-21 seq75 109 6e-19 >seq20 Length=4904830 Score = 253 bits (280), Expect = 2e-62 Identities = 1180/1851 (64%), Gaps = 59/1851 (3%) Strand=Plus/Plus Query 109399 GCCTTCGAGCGAAGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGC 109458 |||| | |||||| || ||||| || || ||||||||| |||||| || | ||| Sbjct 1798429 GCCTGTGTGCGAAGGTAGTACATGCCAGTCTTGAGACCAAGCTTCCAGCCGGCGAAGTGC 1798488 Query 109459 ATTGAAGAGAGTTTGGAAAGTGTCGGACTCTCCATAAACAAGTTCATCGACTGAGACTGA 109518 || | || ||| | || ||| || ||| | ||| | ||||| |||||| Sbjct 1798489 ATGCTGGTGATCTTGCCCATCGTGGGATCCTTCATGTGAATGTTGAGGGACTGGGACTGA 1798548 Query 109519 TCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACACTTTTGGCT----AATTTC 109574 |||||||| ||| || || || ||||| | || | | | ||| ||| || Sbjct 1798549 TCGATGAAAGCACCTCGGTCGGCAGCCATCTGGACAA----CCTGGCGCTGAGAAATCTC 1798604 Query 109575 CCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGA 109634 ||| ||||||||||| | | ||||| || | || |||| |||||| |||||||| Sbjct 1798605 CCAAACAGTCTTGTAAAGAGCCTTGACGTCGGCAGGGATGTTGGGGATGTTCTGAATAGA 1798664 Query 109635 GCCACCAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAGACCGACCTTTTTGAG 109694 || | | | || | | |||||| | | ||||| | || | | || Sbjct 1798665 ACCGTTATCGGAAATAATACGGTTCTTCATGGCATCAGACCACAAGCCCATGTCGACAAG 1798724 Query 109695 ATCGT----CAACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGA 109750 ||| | |||| || | ||||| || || ||||||||||| || || Sbjct 1798725 ATCCTTGAGCAACCAGGGG----TTGACAACCTGGAACTCACCAGCAAGGACTCGGCGCT 1798780 Query 109751 GGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGG 109810 |||| ||||| | ||||| || ||||| ||||| ||||| || || || || | || Sbjct 1798781 GGTAAATGTTGGAGGTGTAAGGCTCGAAGCACTCGTTGTTACCCAGAATCTGCGAGGTAC 1798840 Query 109811 AAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGCT 109870 || || ||||| || || | ||| |||||||| |||| ||| | ||||| || || Sbjct 1798841 TGGCAGTAGGCATAGGGGCAAGGAGCAGACTGTTACGGATACCGTGAGTCTTAACATCCT 1798900 Query 109871 CACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCATCCCACATATCTG 109930 | || | ||||| || || | | | | || | | |||||| || Sbjct 1798901 CTCGAAGGCTCTCCCAGTCCCAAAGGTCGGAA------GGCTTGACGTTCCACATGTCGA 1798954 Query 109931 GTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCT 109990 || || | |||||||| || |||||||||||||| | ||| | ||||| ||| Sbjct 1798955 ACTGGAGGATACCCTCAGAGGCGGGAGAACCCTTGAAGGTAGAGTAGGGACCCTCCTCCT 1799014 Query 109991 CGGCCAACTCGGATGAAGCCTCT-AGTGCCGCATGATACATAGTCTCAAAAATATGAGCA 110049 |||||||| | | | || | | || || || || || || |||||||| || || Sbjct 1799015 TGGCCAACT-GCACGGAGGCAGTGAGGGCAGCGTGGTAGATGGTCTCAAAGATCTGC--- 1799070 Query 110050 TTCATGAGG---CGAGACTCTTCACAGTCGAAGGGAAGACCACAAAG-AATAAACACATC 110105 || |||| | || |||| | | |||||||| | | || || || || |||| Sbjct 1799071 TTGTTGAGCTCTCTAGCCTCTGGAGACTCGAAGGGCATGCG-CAGAGCAAGGAAAGCATC 1799129 Query 110106 CGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGT 110165 || |||||||| ||||| ||||| || || || || |||||| | ||||| Sbjct 1799130 AGCAAGACCCTGTACACCAAGACCGATAGGTCGGTGACGCATGTTGCTGTTGCGAGCCTC 1799189 Query 110166 TTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGT 110225 || || ||||| |||| ||||||| | || | || ||| || | Sbjct 1799190 TTGCACAGGGTAGTGGTTGACATCGATGATCTTGTTCAAGTTGCGGACAACAACCTGACT 1799249 Query 110226 GATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTA-TTGACATATTTGGGGA 110284 || | ||| || || | | |||| | | | || | || |||| | || | Sbjct 1799250 GACCTGATGCAGCTTCTTGAAATCATA-GCAAGCCTCATCATAGTTGATGAAAGCAGGCA 1799308 Query 110285 GAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTT 110344 | |||| || ||||| ||||| |||| ||| || | | ||| || | || | Sbjct 1799309 GGGCAAGGGAGGCAAGGTTGCAAACAGCGACCTCATCAGGGGCACAGTACTCGATGATCT 1799368 Query 110345 CCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGC 110404 | || |||| || || || ||| || | ||||||||| || ||| ||| | Sbjct 1799369 CAGTGCACAGATTAGAGCTTCGGATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTAC 1799428 Query 110405 ATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCT 110464 | |||||||| || |||||| | ||| | || || || ||||| | || ||| ||||| | Sbjct 1799429 AGGCATCCTTGTAAAGCATGAAGGGGTTTCCGGTCTCGGTCTGGGCCTCGAGGATGGCAT 1799488 Query 110465 TCCATA-CATCGGCGGCGGGGACAG--TTGCGTTAGCGAGACCTTCCTCCTCGTACTTGG 110521 ||| | | || | ||| || | ||||| | | ||||||| ||||||||| Sbjct 1799489 ACCAAAGCTTCTG-GGCCTTGATGGACTTGCG--ACCCTTACCTTCCCTCTCGTACTTCT 1799545 Query 110522 TGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGAC 110581 ||| | | ||||||| || | ||||| || | |||||| || || ||| | Sbjct 1799546 CGTAGAGGGCCTCAAACTCTTCACCGTAGCAGTCGGCAAGACCAGGGCACTCGTTGGGGC 1799605 Query 110582 AGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACA 110641 | | ||||| ||| | ||| || |||||| | ||||||||| |||||||| ||||| | Sbjct 1799606 ACATGAGGGTCCACTCTCCGTTCTTCTCAACACGCTTCATGAAAAGGTCAGGGATCCAGA 1799665 Query 110642 TCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCA 110701 ||| ||| ||||| ||| || |||| || | ||| ||||| || || || | Sbjct 1799666 GGGCCAGGAACAGGTCGCGGGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAA 1799725 Query 110702 AAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACGAC 110761 || || | || ||| | |||||| || || || |||| ||| | | || | | | Sbjct 1799726 GGAACTCAAAGACATCAGCGTGCCAAGGCTCAAGGTAGATAGCAAAAGCACC---AGGTC 1799782 Query 110762 G------ACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAA 110815 | ||| |||| | ||| ||||| || ||| |||||||| | |||||||||| Sbjct 1799783 GCTTGTTACCACCCTGATCAACGTAGCGGGCAGTGTTGTTGAAGACACGTAGCATAGGAA 1799842 Query 110816 TAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGT 110875 || || | |||| ||| || ||||| ||| ||| | ||||||| || || Sbjct 1799843 CAACACCGTTGGATGTACCGTTGGTACCAGCAATGTAGGAGCCAGTGGCACGGATTCGGT 1799902 Query 110876 GGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACA-CTCTGTGAGTGTA 110934 || || | |||||||||||| ||| ||| ||| ||||| ||| |||| ||| Sbjct 1799903 GGGCATTGAGACCAATACCACCAGCCATCTTGGAAATCATGGCACAGGTCT-TGAGGGTA 1799961 Query 110935 CCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGA 110994 |||| ||||| ||||| || |||| | ||| | ||||| || || | ||| Sbjct 1799962 TCATAGATACCGTCAATGCTGTCCTCCTTCATATCAACCAAGAAGCATGAGGAAAGCTGG 1800021 Query 110995 GGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTG--GG 111052 || |||| || || || |||||||| || || | ||||| ||| ||| |||| || Sbjct 1800022 GGTTGAGGGGTACCAGCGTTGAAGAGGGTGGGGGAAGCATGGGTGA--AGAACTTGCTGG 1800079 Query 111053 ACATCTTGTTGTATGTGTCGAGTGCGGAGGGT--ACATCTTTACCGTGAATACCAATGGC 111110 |||| ||||||||| || | | | | | | ||| | ||| |||||||| | Sbjct 1800080 ACATAAGGTTGTATGTCTCCAAGAC--ACGCTCAATATCATCACCCCATATACCAATAGA 1800137 Query 111111 AACTCGCATGAACATATATTGAGGCGTTTCGATTAGCTTTCCATCAACACGCTGAAGGTA 111170 || ||||||| ||| | ||||| ||||| | ||| || |||| | ||||| Sbjct 1800138 CACACGCATGATCATGTGCTGAGGACGTTCGACAATCTTGCCGTCAATCTTGAGGAGGTA 1800197 Query 111171 ACTCTTCTCTAGGGTCTTGAGACCAAAGTATCCAAAATCGAAATCACGATC 111221 ||| | ||||||| ||||||||| | | ||||||||| || Sbjct 1800198 TGATCGCTCCAACGTCTTGAAGCCAAAGTATTGGTATTGGAAATCACGGTC 1800248 >seq53 Length=1666795 Score = 116 bits (128), Expect = 4e-21 Identities = 188/264 (71%), Gaps = 6/264 (2%) Strand=Plus/Minus Query 11737 AAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGCA 11796 || |||||||| || ||||| ||||||||||| ||||| ||||| | || || | || Sbjct 1330189 AAGAGTTCACGGACTCGCTTGGCTCCAACACCAACGAAGATCTCGTCAAA-TTCACTGCC 1330131 Query 11797 GAACACTGA-ATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTT 11855 | ||| | | ||| |||||| || |||||||| | |||||||||||||| ||||| Sbjct 1330130 GGACATGTAGAAGAACGGAACACCAGCTTCACCAGCAACAGCTCGAGCGAGGAGCGTCTT 1330071 Query 11856 ACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC-ACTTC-CA 11913 ||| |||||||| | ||| | || ||| | || ||| | |||||||| | || | Sbjct 1330070 ACCGGTACCAGGAGGACCGACCAGGAGGACACCCTTGGGAAGTTTGGCACCGAGGTCGCT 1330011 Query 11914 AAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGCGGAG 11973 || | ||||| ||||| || || || || | |||| |||||||||||||| Sbjct 1330010 AA--ACTTTTCAGGGTTCTTCAGAAACTCGACGACTTCCTGGAGTTCCTCCTTGGCTTCA 1329953 Query 11974 TCGATACCCTCAACATCGGTGAAA 11997 || ||| | |||||| ||||| Sbjct 1329952 TCACAACCGTGGACATCGTTGAAA 1329929 >seq75 Length=4106073 Score = 109 bits (120), Expect = 6e-19 Identities = 260/383 (68%), Gaps = 30/383 (8%) Strand=Plus/Minus Query 11588 TGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTT-- 11645 ||| |||||| ||||| || ||||||| |||||| | ||| ||| ||||| ||||| Sbjct 1662010 TGTTGAAACCATCCATCTCAGTGAGAATCTGGTTCAGGGTCGCTTCCCGCTCGTCGTTAC 1661951 Query 11646 ----GGAG----GGCATACCACCTGCCGAACGCTTCTTACCGACAGCGTCAATCTCATCG 11697 | || ||| | |||| || | | || | | ||||||||||||||| Sbjct 1661950 CACCGAAGCCTCGGCCGCTCTCCTGTCGGGCACGTC----CAATTGCGTCAATCTCATCG 1661895 Query 11698 ATGAATACGATACACGGTTGGTTGGCACGTGCCTGTTCG---AAAAGTTCACGTACACGC 11754 || || | |||||| || || || |||| ||| || || || || ||||| Sbjct 1661894 ATAAAGATGATACAGGGAGCATTCTTGCG-GCCT--TCGGCAAACAGATCTCGCACACGA 1661838 Query 11755 TTCGCTCCAACACCTACGAACATCTCAACGAAGTTTG--CGGCAGAACACTGAATGAAGG 11812 | || ||||| ||||||||||||||||| | | | || | ||||||| ||||| Sbjct 1661837 GAAGGACCGACACCCACGAACATCTCAACGAATTCGGAACCGCTCA-CACTGAA-GAAGG 1661780 Query 11813 GAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCAC 11872 | || |||||| ||||| |||| || || | ||||| || |||||||| | | Sbjct 1661779 GCACTCCAGACTCGCCAGCCGTGGCCTTGGCAAGCAACGTCTTTCCAGTACCAGGAGGGC 1661720 Query 11873 CAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC--ACTTC-CAAAGTAGCGCTCAGGCT 11929 |||| || | || || || |||||||||||||| |||| | || | |||||||| Sbjct 1661719 CAGCCAGGATAGCACCTCGAGGGATCTTGGCACCCAGCTTCTCGAACT---TCTCAGGCT 1661663 Query 11930 TCTTGAGGAAGTCCACAATCTCC 11952 ||| |||||| |||| |||| Sbjct 1661662 GCTTCAGGAAGCTAACAAACTCC 1661640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975226969000