Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769305.1_202014-10-10] 105 sequences; 42,707,783 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq15 93.3 5e-14 >seq15 Length=2054260 Score = 93.3 bits (102), Expect = 5e-14 Identities = 259/397 (65%), Gaps = 3/397 (1%) Strand=Plus/Minus Query 154711 GAAATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATGG 154770 |||| || || |||| || | || || || || || || ||||| |||| ||||| Sbjct 1112559 GAAAGGTTTGCCTGATCCCTGTTTCTGCTCACGGCACCAACCCTGCCTCCGCTGCCATGG 1112500 Query 154771 CAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGATGA---TGGTAACATAGACATCAAAG 154827 | || ||||| || || |||||||||||| | | | ||||||| | ||| || | | Sbjct 1112499 CCGGTATGAAGGTCGTCACTGTCAAGTGTGACGCTAAGACTGGTAACCTGGACGTCGAGG 1112440 Query 154828 ATCTAGAGAAGAAAGCAATCATGAATACATTTGAACTGTCATGTATTATGATTACATACC 154887 |||| || || ||| | | | |||||| | | || ||| ||||||||| Sbjct 1112439 ATCTCAAGGCCAAGTGCGTCAAGCACGCGGATGAACTTGCTGGCATCATGGTTACATACC 1112380 Query 154888 CATCTACACATGGTGTATTTGAAACTAACATTAGACAGATATGTAAGATCGTTCATGACA 154947 | || || |||||| || || | | || | ||| | || | | || || || Sbjct 1112379 CTTCCACCTTTGGTGTCTTCGAGCCCGAGATCAAGCAGGTCTGCGACCTTGTCCACGAGC 1112320 Query 154948 ATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAAC 155007 |||| |||| || || | || || || || | || || ||| | || || | | Sbjct 1112319 ATGGCGGTCTCGTCTACATGGACGGTGCCAACATGAACGCCCAGATTGGTCTCTGCAGCC 1112260 Query 155008 CATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCAC 155067 | |||| || || ||||| || ||||| ||| | || || || ||||||||||| | Sbjct 1112259 CCGGTGACATCGGCGCTGATGTCTGCCATCTCAACCTCCACAAGACCTTCTGTATTCCCC 1112200 Query 155068 ATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104 | || ||||| || || || || || ||||| | ||| Sbjct 1112199 ACGGTGGTGGTGGCCCCGGTGTTGGCCCTATCGCTGT 1112163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579212039783200