Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769305.1_202014-10-10] 105 sequences; 42,707,783 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq15 114 2e-20 >seq15 Length=2054260 Score = 114 bits (126), Expect = 2e-20 Identities = 264/397 (66%), Gaps = 3/397 (1%) Strand=Plus/Minus Query 159386 GAAATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGG 159445 |||| || || |||| || | || || || || || || ||||| || || | |||| Sbjct 1112559 GAAAGGTTTGCCTGATCCCTGTTTCTGCTCACGGCACCAACCCTGCCTCCGCTGCCATGG 1112500 Query 159446 CAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGATGA---TGGCAACATAGACATCAAAG 159502 | || ||||| || || |||||||||||| | | | ||| ||| | ||| || | | Sbjct 1112499 CCGGTATGAAGGTCGTCACTGTCAAGTGTGACGCTAAGACTGGTAACCTGGACGTCGAGG 1112440 Query 159503 ATCTAGAGAAGAAAGCAATCATGAATACATTTGAACTGTCATGTATTATGATTACATATC 159562 |||| || || ||| | | | |||||| | | || ||| ||||||| | Sbjct 1112439 ATCTCAAGGCCAAGTGCGTCAAGCACGCGGATGAACTTGCTGGCATCATGGTTACATACC 1112380 Query 159563 CATCTACACATGGTGTATTTGAAACAAACATCAGACAGATATGTAAGATTGTTCATGAGA 159622 | || || |||||| || || | | |||| ||| | || | |||| || ||| Sbjct 1112379 CTTCCACCTTTGGTGTCTTCGAGCCCGAGATCAAGCAGGTCTGCGACCTTGTCCACGAGC 1112320 Query 159623 ATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAAC 159682 |||| |||| || || | || ||||| || | || || ||| | ||||| | | Sbjct 1112319 ATGGCGGTCTCGTCTACATGGACGGTGCCAACATGAACGCCCAGATTGGTCTCTGCAGCC 1112260 Query 159683 CATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCAC 159742 | ||||| || || ||||| || ||||| ||| | || ||||| ||||||||||| | Sbjct 1112259 CCGGTGACATCGGCGCTGATGTCTGCCATCTCAACCTCCACAAGACCTTCTGTATTCCCC 1112200 Query 159743 ATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779 | || ||||| || || || || || ||||| | ||| Sbjct 1112199 ACGGTGGTGGTGGCCCCGGTGTTGGCCCTATCGCTGT 1112163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588050428182800