Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769305.1_202014-10-10] 105 sequences; 42,707,783 total letters Query= NC_015323.1 Length=45667 Score E Sequences producing significant alignments: (Bits) Value seq17 80.6 8e-11 >seq17 Length=3294471 Score = 80.6 bits (88), Expect = 8e-11 Identities = 141/203 (69%), Gaps = 8/203 (4%) Strand=Plus/Plus Query 986 ATGGGAGAATCGCTCCTCGCTCGGGATTGGCTGCAAAGTTCTTTATAGATGTGGGGGCGG 1045 |||| |||| |||||||| || || | ||| | ||| |||||| ||| || || | Sbjct 199387 ATGGCCGAATTGCTCCTCGATCAGGCCTCGCTTCCAAGCACTTTATCGATACCGGCGCAG 199446 Query 1046 GTGTGATAGATGCTGATTATCGCGGTGAAGTGAAGGTGCTCTTGTTCAATTTTTCGCAAC 1105 |||| || || || ||||| |||||| | || ||||| || | ||||| | |||| Sbjct 199447 GTGTCATTGACGCCGATTACCGCGGTCAGGTCAAGGTCCTGCTTTTCAAC----CACAAC 199502 Query 1106 ATG--CG--TTCAACGTTCGGAAGGGAGACCGTATCGCTCAGCTCGTTGTTGAGCGAATC 1161 | || ||| | || | |||| ||||| ||||||||||| || | ||||| ||| Sbjct 199503 GAGTCCGACTTCGAGGTCAAGGAGGGCGACCGCATCGCTCAGCTTGTCTTGGAGCGCATC 199562 Query 1162 TTTACACCGGAGCTCGAGGAGGT 1184 | || ||||| ||| ||||| Sbjct 199563 TACACCCCGGAAGTCGTCGAGGT 199585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146012617940290