Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769305.1_202014-10-10] 105 sequences; 42,707,783 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq1 105 4e-18 seq64 84.2 1e-11 >seq1 Length=1290987 Score = 105 bits (116), Expect = 4e-18 Identities = 150/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||||||||| | || || ||||||||||| ||||| |||||| ||||| | || || Sbjct 575206 AACCAAGTGCAGAGTTGACTCCTTCTGAATGTTGTAGTCAGAAAGGGTTCGTCCGTCCTC 575147 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 || || || || || || || ||||| || ||||| | || | ||||||||||| Sbjct 575146 TAGTTGCTTGCCAGCGAAGATAAGTCGCTGTTGGTCAGGAGGAATACCCTCCTTGTCCTG 575087 Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951 |||||| |||||| | || | ||| | ||| || || | || |||||||| Sbjct 575086 GATCTTCGACTTGACGTTGTCGATGGTGTCAGATGACTCGACTTCCAATGTGATGGTTTT 575027 Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 ||| || || ||||| || ||||| |||||| Sbjct 575026 TCCGGTAAGGGTCTTGACGAAGATTTGCATA 574996 Score = 84.2 bits (92), Expect = 1e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34779 TGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGT 34838 |||| |||| ||| ||||| ||||| ||||| | ||| |||| |||| || ||||| Sbjct 574971 TGAAGTGTGGATTCCTTCTGGATGTTGTAGTCGGCGAGGGTTCGGCCATCCTCAAGCTGC 574912 Query 34839 TTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTC 34898 || || ||||| || || || || ||||| | || | ||||||||||| |||||| Sbjct 574911 TTGCCAGCAAAGATCAGGCGCTGTTGGTCGGGAGGAATACCCTCCTTGTCCTGGATCTTC 574852 Query 34899 TGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTG 34958 |||||| | || | || || ||| || || | || ||||| || || ||| Sbjct 574851 GACTTGACGTTGTCGATGGTATCGGAGGACTCGACCTCAAGAGTGATGGTCTTGCCAGTG 574792 Query 34959 AGAGTCTTCAC 34969 || ||||| || Sbjct 574791 AGGGTCTTGAC 574781 >seq64 Length=1477960 Score = 84.2 bits (92), Expect = 1e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||| | ||| || ||||| ||||| ||||| ||| | || |||| || Sbjct 659788 ACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCG 659729 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || ||||| || ||||| |||||||| | || | ||||||||||| Sbjct 659728 AGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGG 659669 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| |||||| | || | || | ||| || || | ||| || || || Sbjct 659668 ATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTC 659609 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 |||||||| ||||| || || |||||||| Sbjct 659608 CCCGTGAGGGTCTTGACGAAAATCTGCAT 659580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324633184570440