Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769305.1_202014-10-10] 105 sequences; 42,707,783 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq15 102 9e-17 >seq15 Length=2054260 Score = 102 bits (112), Expect = 9e-17 Identities = 261/397 (66%), Gaps = 3/397 (1%) Strand=Plus/Plus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 ||| | ||||| || || || || || ||||| || || ||||||||||| ||||| || Sbjct 1112163 ACAGCGATAGGGCCAACACCGGGGCCACCACCACCGTGGGGAATACAGAAGGTCTTGTGG 1112222 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 | || ||||| || ||||| || || ||||| || | ||||| | ||| || Sbjct 1112223 AGGTTGAGATGGCAGACATCAGCGCCGATGTCACCGGGGCTGCAGAGACCAATCTGGGCG 1112282 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362 || | || ||||| || | || || |||| |||| || || || | | || | | Sbjct 1112283 TTCATGTTGGCACCGTCCATGTAGACGAGACCGCCATGCTCGTGGACAAGGTCGCAGACC 1112342 Query 138363 TGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGAG 138422 || |||| | | || || |||||| || || || ||||||| ||| || | | Sbjct 1112343 TGCTTGATCTCGGGCTCGAAGACACCAAAGGTGGAAGGGTATGTAACCATGATGCCAGCA 1112402 Query 138423 AGTTCAAATGTATTCATGATTGCTTTCTTCTCTAGATCTTTGATGTCTATGTTGCCA--- 138479 |||||| | | | ||| || || ||||| | || ||| | ||| ||| Sbjct 1112403 AGTTCATCCGCGTGCTTGACGCACTTGGCCTTGAGATCCTCGACGTCCAGGTTACCAGTC 1112462 Query 138480 TCATCATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGGATTA 138539 | | | |||||||||||| || || ||||| || |||||| | || ||||| || Sbjct 1112463 TTAGCGTCACACTTGACAGTGACGACCTTCATACCGGCCATGGCAGCGGAGGCAGGGTTG 1112522 Query 138540 GTTCCATGTGCTGACTCTGGTATCAGACATACATTTC 138576 || || || || || | || ||||| || || |||| Sbjct 1112523 GTGCCGTGAGCAGAAACAGGGATCAGGCAAACCTTTC 1112559 Score = 100 bits (110), Expect = 3e-16 Identities = 168/243 (69%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 139271 ACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCTGTGCAGAT 139330 ||| || || | || ||||| | ||||| || || || || || || || |||||||| Sbjct 1113314 ACCGTGGTAGACCGCGTAGAAGGCGGACATGTTGGCAAGAAGAGCCTGGGCCGTGCAGAT 1113373 Query 139331 GTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCTAATCTGTA 139390 ||| ||||| || || || | || |||||||||||| | ||| || || || | | Sbjct 1113374 GTTGCTGGTGGCCTTCTCACGTCGAATATGCTGCTCACGAGTCTGGAGAGCGAGACGCAG 1113433 Query 139391 TGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGTATCTTTCTCTT 139450 ||||| ||||| || ||| || ||| || | | ||| || ||||| | ||| Sbjct 1113434 AGCAGGCTTGCCGAGGCGATCCTTGGAAACACCGACGAGACGGCCGGGGATCTTGCGCTT 1113493 Query 139451 ATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCCATAGGAATACC 139510 ||||| || | || || ||||| ||||| || ||||| ||||| |||| || | ||| Sbjct 1113494 GTACTTCTCAGAGGTAGCGAAGAAAGCAGCGTGGGGACCACCGTAGCCCAGGGGGACACC 1113553 Query 139511 AAA 139513 || Sbjct 1113554 GAA 1113556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578997640064600