Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769305.1_202014-10-10] 105 sequences; 42,707,783 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq20 224 1e-53 seq53 87.8 2e-12 >seq20 Length=4904830 Score = 224 bits (248), Expect = 1e-53 Identities = 930/1442 (64%), Gaps = 49/1442 (3%) Strand=Plus/Minus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 || ||| ||||| ||||||| || | || || || || || || ||||| |||| Sbjct 1800161 CCTCAGCACATGATCATGCGTGTGTCTATTGGTATATGGGGTGATGATATTGAGCGTGTC 1800102 Query 75272 TTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTCT 75329 |||||||||||| || |||||| |||| | | ||| || || | || ||||||| Sbjct 1800101 TTGGAGACATACAACCTTATGTCCAGCAAGTTCT--TCACCCATGCTTCCCCCACCCTCT 1800044 Query 75330 TCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 75389 |||| |||||||| || ||| ||| | ||| |||||| | | | | ||||||| Sbjct 1800043 TCAACGCTGGTACCCCTCAACCCCAGCTTTCCTCATGCTTCTTGGTTGATATGAAGGAGG 1799984 Query 75390 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 75449 || || |||||||||||| || || | | ||||| || || ||| ||||| Sbjct 1799983 ACAGCATTGACGGTATCTATGATACCCTCAAGACCTGTGCCATGATTTCCAAGATGGCTG 1799924 Query 75450 GGGGTATTGGG----ATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGG 75505 | |||||||| |||| || | | ||| ||| | || ||| || Sbjct 1799923 GTGGTATTGGTCTCAATGCCCACCGAATCCGTG----CCACTGGCTCCTACATTGCTGGT 1799868 Query 75506 ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGC 75565 || || ||| ||| | ||| || |||| ||||| || || || ||| ||| || ||| Sbjct 1799867 ACCAACGGTACATCCAACGGTGTTGTTCCTATGCTACGTGTCTTCAACAACACTGCCCGC 1799808 Query 75566 TATGTAAATCAAGCGGGGCGTCGCAAGGG-----GTCCATC-GCGGTCTACTTGGAACCA 75619 || || |||| ||| || |||| | || | | || ||||| | || || Sbjct 1799807 TACGTTGATCA---GGGTGGTAACAAGCGACCTGGTGCTTTTGCTATCTACCTTGAGCCT 1799751 Query 75620 TGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCT 75679 ||||| || ||| || | ||||||||||| | ||| ||||| ||| | || |||| Sbjct 1799750 TGGCACGCTGATGTCTTTGAGTTCCTTGATCTCCGAAAGAACCACGGTAAGGAGGAGGTC 1799691 Query 75680 CGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAG 75739 || | || || || |||| ||||| || ||||||||||||||||| |||||| Sbjct 1799690 CGCGCCCGCGACCTGTTCCTGGCCCTCTGGATCCCTGACCTTTTCATGAAGCGTGTTGAG 1799631 Query 75740 GAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTG 75799 || || | ||| | || | || || || || || ||||| ||||| Sbjct 1799630 AAGAACGGAGAGTGGACCCTCATGTGCCCCAACGAGTGCCCTGGTCTTGCCGACTGCTAC 1799571 Query 75800 GGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTA-GAGCCAATGCGAC 75858 ||||| |||||||| ||||||||| ||||| || ||| |||| | | | || | Sbjct 1799570 GGTGAAGAGTTTGAGGCCCTCTACGAGAAGTACGAGAGGGAAGGTAAGGGTC---GCAAG 1799514 Query 75859 TGTACCA-GCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACA 75916 | | || | | | || | ||||| | || || ||| | | ||||| ||||| |||| Sbjct 1799513 TCCATCAAGGCCCAGAAGCTTTGGTATGCCATCCTCGAGGCCCAGACCGAGACCGGAAAC 1799454 Query 75917 CCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACA 75976 || | ||||||||||||||||| |||||| ||||| ||||| ||||| | || || Sbjct 1799453 CCCTTCATGCTTTACAAGGATGCCTGTAACCGCAAGAGCAACCAGAAGAACCTCGGCACC 1799394 Query 75977 ATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCT 76036 ||| ||||| ||||| ||||| || || | |||||| | |||||| ||| Sbjct 1799393 ATCCGAAGCTCTAATCTGTGCACTGAGATCATCGAGTACTGTGCCCCTGATGAGGTCGCT 1799334 Query 76037 GTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCA---ATGAAGAGACTCGCACT 76093 |||||||| | || || | ||||| || | ||| |||| ||| || || Sbjct 1799333 GTTTGCAACCTTGCCTCCCTTGCCCTGCCTGCTTTCATCAACTATGATGAGGCTTGC--- 1799277 Query 76094 TTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTC 76153 | ||||| | || || ||| | ||| || ||||| | || | ||| || Sbjct 1799276 TATGATTTCAAGAAGCTGCATCAGGTCAGTCAGGTTGTTGTCCGCAACTTGAACAAGATC 1799217 Query 76154 ATTGACAGAAATTTTTATCCCGT---TGAGACTGCGCGAAAGTCTAATATGCGACACAGA 76210 || || || || || || ||| || ||| | || || ||||| ||| || Sbjct 1799216 ATCGATGTCAACCACTACCCTGTGCAAGAGGCT-CGCAACAG--CAACATGCGTCACCGA 1799160 Query 76211 CCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATT-TTGTGCCGCTACGCATT 76269 ||||| ||| | ||||| || ||||| || |||| || || | || ||| | || Sbjct 1799159 CCTATCGGTCTTGGTGTACAGGGTCTTGCTGATGCTTTCCTTGCTCTG-CGCATGCCCTT 1799101 Query 76270 TGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATC 76329 || || || || | ||| | || | |||||||| ||||| || ||||| | Sbjct 1799100 CGAGTCTCCAGAGGCTAGAGAGCTCAACAAGCAGATCTTTGAGACCATCTACCACGCTGC 1799041 Query 76330 CCTGGAGGCGAGTTGTG-AATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTT 76388 ||| || ||| | ||||| | | | ||| |||| || || |||||| Sbjct 1799040 CCTCACTGC-CTCCGTGCAGTTGGCCAAGGAGGAGGGTCCCTACTCTACCTTCAAGGGTT 1798982 Query 76389 CTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGC-TCAAC 76447 ||||||| || | || | || ||||| || |||| |||| || || || | | Sbjct 1798981 CTCCCGCCTCTGAGGGTATCCTCCAGTTCGACATGT-GGAACGTCAAGCCTTCCGACCTT 1798923 Query 76448 TACGACTGGGA-TGTTCTCAAG-GAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTT 76505 | |||||||| | || || | | | | ||| | ||| | ||||||||||| Sbjct 1798922 TGGGACTGGGAGAGCCTTCGAGAGGATG--TTAAGACTCACGGTATCCGTAACAGTCTGC 1798865 Query 76506 TGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTG 76565 | | || || ||||| || ||| ||| | || || ||||||| || || ||||| | Sbjct 1798864 TCCTTGCCCCTATGCCTACTGCCAGTACCTCGCAGATTCTGGGTAACAACGAGTGCTTCG 1798805 Query 76566 AACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCA 76625 | || ||||| | ||||| |||| | | || ||| || |||||||| |||||| Sbjct 1798804 AGCCTTACACCTCCAACATTTACCAGCGCCGAGTCCTTGCTGGTGAGTTCCAGGTTGTCA 1798745 Query 76626 AC 76627 || Sbjct 1798744 AC 1798743 >seq53 Length=1666795 Score = 87.8 bits (96), Expect = 2e-12 Identities = 201/294 (68%), Gaps = 14/294 (5%) Strand=Plus/Plus Query 175213 GCCAAAGATGAACTTGAAGAGATTGTGGATTTTCTCAAGCAACCCGAGAGATATTTTG-G 175271 ||||| || ||||| | || | || || ||||| ||| ||||| || | ||| | | Sbjct 1329957 GCCAAGGAGGAACTCCAGGAAGTCGTCGAGTTTCTGAAG-AACCCT-GAAAAGTTTAGCG 1330014 Query 175272 AAGT-GGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGA 175330 | | |||||||| | ||| || | ||| || | ||| || ||||| || |||| Sbjct 1330015 ACCTCGGTGCCAAACTTCCCAAGGGTGTCCTCCTGGTCGGTCCTCCTGGTACCGGTAAGA 1330074 Query 175331 CCCTCCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATCCAG-TGCTCTGCC 175389 | |||||||| ||||| | || |||||| | ||| || ||| || | || | || Sbjct 1330075 CGCTCCTCGCTCGAGCTGTTGCTGGTGAAGCTGGTGTTCCGTTCTTCTACATGTCCGGCA 1330134 Query 175390 GCAAACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAA 175449 | || |||| ||||| || |||||||| || ||||| | || || || |||||| Sbjct 1330135 GTGAA-TTTGACGAGATCTTCGTTGGTGTTGGAGCCAAGCGAGTCCGTGAACTCTTTA-- 1330191 Query 175450 ATCGCCCGCGAAAATCAA----CCATGTATTGTCTTCATTGATGAGATTGATGC 175499 | |||| || | ||| || | |||||||||||||||||| ||||||| Sbjct 1330192 --CTGCCGCCAAGAACAAGTCTCCCTCTATTGTCTTCATTGATGAACTTGATGC 1330243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596568817002400