Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769305.1_202014-10-10] 105 sequences; 42,707,783 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq14 131 3e-24 seq75 122 1e-21 seq20 95.1 2e-13 >seq14 Length=1508566 Score = 131 bits (144), Expect = 3e-24 Identities = 231/331 (70%), Gaps = 13/331 (4%) Strand=Plus/Minus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 || ||||| ||| ||| | |||||| ||| | |||||||||||||| |||||| Sbjct 135605 CCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAAACCGGGCATGAGGCCACGCTTC 135546 Query 794401 TTGAGCCAAAAGAT---GGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCA 794457 |||||||| ||||| |||| || || || ||| ||||| |||||||| || || Sbjct 135545 TTGAGCCAGAAGATGGAGGCAAAGGCACCGC---TGAAGAAGATACCCTCGACAGCAGCG 135489 Query 794458 AAGCCGACGAGCCGCTCGGCAAAAGTGTCCAG-GCCCTCTTTGTTGATCCACTTCATCGC 794516 ||| | || || || | |||||| || || | ||| | | |||||| || || Sbjct 135488 AAGGCAACCAGACGTTGGGCAAAGGT----AGAGTCCTTGTCCTGGATCCATCGAATGGC 135433 Query 794517 CCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGT-GGTCCT 794575 ||| || ||||| || | | |||| | || || | ||| ||||||| ||| | Sbjct 135432 CCAGTCAGCCTTCTTTCGGATGCAGGGAATGGTATCAACAGCGTTGAAGAGGTAGGTTC- 135374 Query 794576 TCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGT 794635 || | | || ||||||| ||||||||| ||||| || || |||||||| ||||| || | Sbjct 135373 GCTGGGCAGGCTCCTTGATGTAGGTGTCAATGAGCAGGGAATAGGTCTCGGAGTGAATAT 135314 Query 794636 TTTCGATGGCGATCTGGAAGCCATAAAAGCA 794666 | || || ||| ||||| || || ||||| Sbjct 135313 TCTCCATCATGATTTGGAATCCGTAGAAGCA 135283 Score = 89.7 bits (98), Expect = 8e-12 Identities = 151/217 (70%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 793917 ACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAAC 793976 || ||| |||||| |||||||||||||| | || ||||| |||||| | ||| Sbjct 135902 ACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGGGAGATGTTCTCCATGAAGTCGAAG 135843 Query 793977 GGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAG--CGACGCAAGCAGGCGGTCGGCGA 794034 ||||| | | | ||| ||||||| ||||| ||||| || || ||||| |||| Sbjct 135842 GGGTTTGTGGCCTTGTAAACCTTCTCGTTGCCGAGAGCGACG--AGTAGACGGTCAGCGA 135785 Query 794035 CGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACGGGCAGCG 794094 | || ||||||||||| ||| ||| || ||||||||| | || || ||| || | Sbjct 135784 CAAACTCAATGTACTGCTTCATCAGGTTGGAGTTCATGCCAAGCAGGGCACAGGGGAGAG 135725 Query 794095 ACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTC 794131 ||| ||| ||||| | ||| || |||||| || Sbjct 135724 CCTCAGTGAGGAACTCCTGCTCAATGGTGACGGCATC 135688 >seq75 Length=4106073 Score = 122 bits (134), Expect = 1e-21 Identities = 93/110 (85%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 2035652 CAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTAT 2035711 ||||||||| ||||||||||||||||| ||| | || ||||| ||||| |||||| | || Sbjct 2894607 CAACTACCTTGACATCAAGCCCCTCCTTGATGTTGGCTGCAAAACCGTTGCCAACATGAT 2894666 Query 2035712 CAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761 |||||||||||| || ||||| || |||||||| || ||||||| | ||| Sbjct 2894667 CAAGGGCAAGTCTCCTGAGGAAATTCGCAAGACGTTCAACATCACGAACG 2894716 >seq20 Length=4904830 Score = 95.1 bits (104), Expect = 2e-13 Identities = 76/92 (83%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 |||||||||||| |||||||||||||| |||||||||||| |||| || || || | | Sbjct 2581161 GTACTTGGTGACAGCCTTGGTACCCTCAGAGACGGCGTGCTTGGCAAGCTCACCAGGGAG 2581220 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGG 1485562 ||| || || || | |||||||||||| |||| Sbjct 2581221 GATGAGACGAACTGAGGTCTGGATCTCTCGGG 2581252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916235230671095