Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769305.1_202014-10-10] 105 sequences; 42,707,783 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq1 134 1e-26 seq64 131 2e-25 seq14 118 1e-21 seq31 104 2e-17 >seq1 Length=1290987 Score = 134 bits (148), Expect = 1e-26 Identities = 155/206 (75%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||||||||| ||||| || |||||||| | ||| | | | ||||| |||| Sbjct 574690 ATGGAGGGTGGACTCCTTCTGGATGTTGTAATCAGAGAGGGTGCGGCCA-TCCTCAAGCT 574632 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 ||||||| ||| |||| | ||||||||||| ||||||||||| |||||||| |||| Sbjct 574631 GCTTGCCAGCGAAAATCAATCGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGAATCT 574572 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||||| | || | ||||||| | ||| || |||| ||||| ||| ||||||| Sbjct 574571 TGGACTTGACATTGTCGATAGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGG 574512 Query 133636 TCAGAGTTTTTACGAAAATCTGCATG 133661 ||| || || ||||| || |||||| Sbjct 574511 TCAAGGTCTTGACGAAGATTTGCATG 574486 Score = 118 bits (130), Expect = 1e-21 Identities = 147/199 (74%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| ||||| ||||| |||||||| |||| || ||| ||| |||||| |||||||| | Sbjct 575422 GGTAGACTCCTTCTGGATATTGTAGTCGCTCAAAGTGCGACC-GTCCTCCAGCTGCTTAC 575364 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | || || ||||||||||| || || || || |||||||| ||||| || Sbjct 575363 CAGCGAAGATAAGACGCTGCTGGTCAGGGGGAATACCCTCCTTGTCTTGAATCTTGCTCT 575304 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | |||| |||||| | | || || || | ||||| || || || || |||| Sbjct 575303 TCACGTTGTCAATAGTGTCGCTTGATTCGACCTCAAGGGTGATAGTCTTTCCAGTGAGAG 575244 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || |||||||||||||| Sbjct 575243 TCTTGACGAAAATCTGCAT 575225 Score = 93.3 bits (102), Expect = 4e-14 Identities = 135/188 (72%), Gaps = 2/188 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 ||||| || ||||| || ||||| ||| | | || | | | ||||| ||||||||||| Sbjct 574965 GTGGATTCCTTCTGGATGTTGTAGTCGGCGAGGGTTCGGCCA-TCCTCAAGCTGCTTGCC 574907 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || || ||||| ||||||||||| || || |||||||| |||||| ||| Sbjct 574906 AGCAAAGATCAGGCGCTGTTGGTCGGGAGGAATACCCTCCTTGTCCTGGATCTTCGACTT 574847 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | || |||| || ||| || || | |||| ||| ||||| || || || Sbjct 574846 GACGTTGTCGATGGTATCGGAGGACTCGACCTCAAGAGTGATGGTCTTGCCAGTGAGGGT 574787 Query 133643 TTTTACGA 133650 || |||| Sbjct 574786 CTTGACGA 574779 >seq64 Length=1477960 Score = 131 bits (144), Expect = 2e-25 Identities = 150/199 (75%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| ||||| || ||||| |||| || ||| | | | |||||||||||||| || Sbjct 659776 GTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCA-TCCTCGAGCTGCTTACC 659718 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || || ||||||||||| || || ||||| |||||||| |||||| ||| Sbjct 659717 AGCAAAGATAAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTT 659658 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | |||| ||||||| | |||||| || | ||||| || || || || || || Sbjct 659657 GACGTTGTCAATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGT 659598 Query 133643 TTTTACGAAAATCTGCATG 133661 || ||||||||||||||| Sbjct 659597 CTTGACGAAAATCTGCATG 659579 >seq14 Length=1508566 Score = 118 bits (130), Expect = 1e-21 Identities = 344/525 (66%), Gaps = 21/525 (4%) Strand=Plus/Minus Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 || ||| || |||| || ||||| || ||||| || ||||| | | || ||||| | Sbjct 135915 CTGGTAGTCAGCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCAAGGGAGATGTTCTC 135856 Query 120411 CATAAACTCGAACGGGTTGCTCGCGTT--AAAGTATTTCGGCTGGCCCAACTGTACGAGC 120468 ||| || ||||| ||||| | || || ||| | ||| | ||| | ||||| Sbjct 135855 CATGAAGTCGAAGGGGTTTGTGGCCTTGTAAACCTTCTCG--TTGCCGAGAGCGACGAGT 135798 Query 120469 AGTCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAAC 120528 || ||||| || |||||||||||||||| ||| | | ||||||||| |||| Sbjct 135797 AGACGGTCAGCGACAAACTCAATGTACTGCTTCATCAGGTTGGAGTTCATGCCAAGCAGG 135738 Query 120529 GCCACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATG 120588 || || | ||| |||| ||||||| ||||||| || || || | ||| Sbjct 135737 GCACAGGGGAGAGCCTCAGTGAGGAACTCCTGCTCAATGGTGACGGCATCACAAATGATG 135678 Query 120589 GCGAGCATAGTGTG-------GCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAG 120641 | | || | || || ||| |||| | ||| | || | || | | Sbjct 135677 TCCTGGATCATCTGCTTGCTAGCACGGCC-CTTGAG----ATGGGAGT---GAAGAA--G 135628 Query 120642 GCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAG 120701 ||| |||||||| ||||| ||||||||||| || || || ||||||||| || |||| Sbjct 135627 GCAGGCAAAGTCGGTGTGAAGGCCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAA 135568 Query 120702 GCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAA 120761 |||||||||| ||| | |||||| |||| |||| ||||||| || ||||| Sbjct 135567 ACCGGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAA 135508 Query 120762 CACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTC 120821 | ||||| || || ||||| |||| || | ||| || || | |||| | Sbjct 135507 GATACCCTCGACAGCAGCGAAGGCAACCAGACGTTGGGCAAAGGTAGAGTCCTTGTCCTG 135448 Query 120822 GATCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGGCAT 120866 |||||| |||||||| || ||||| || || | ||| || || Sbjct 135447 GATCCATCGAATGGCCCAGTCAGCCTTCTTTCGGATGCAGGGAAT 135403 >seq31 Length=4752496 Score = 104 bits (114), Expect = 2e-17 Identities = 111/147 (76%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 |||||||||||||| || ||| | || || ||||| ||||| || || ||||| |||||| Sbjct 3795620 TCCTCGAGCTGCTTACCAGCGAAGATCAGTCGCTGTTGGTCCGGGGGAATGCCCTCCTTG 3795561 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||| | || | ||||| | || ||| || |||| ||||| | Sbjct 3795560 TCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATG 3795501 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAA 133652 || ||||| ||||| || || |||||| Sbjct 3795500 GTCTTGCCCGTCAGGGTCTTGACGAAA 3795474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420165510200