Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769305.1_202014-10-10] 105 sequences; 42,707,783 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq42 107 5e-18 seq96 86.0 1e-11 >seq42 Length=4624997 Score = 107 bits (118), Expect = 5e-18 Identities = 183/263 (70%), Gaps = 2/263 (1%) Strand=Plus/Plus Query 279873 TGGATGGTTTGAAACCTTCACAGCGTAAGATTATATTCAGTTGTTTCAAAAGAAAATTGG 279932 |||||||||| || ||| ||||| ||| |||| | ||| ||||||||||| |||| Sbjct 2912372 TGGATGGTTTCAAGCCTGGTCAGCGCAAGGTTATCTATGCTTGCTTCAAAAGAAACTTGG 2912431 Query 279933 TAAAGGAAATTCGTGTTGCTCAGTTAGCAGGTTATGTTTCAGAACATGCAGGTTATCATC 279992 | ||||| | |||| | | || | |||||||| || ||||| | | || || | Sbjct 2912432 TCAAGGATAAGAAGGTTGTTGAATTGTCTGGTTATGTGTCCGAACAAACGGCGTACCACC 2912491 Query 279993 ACGGTGAAGCGTCTCTTCAAGGTGCTATTGTAGGTCTTGCCCAAGATTTTATGGCTTCAA 280052 ||||||| |||||||||| | || |||| ||||| || | ||| ||| ||||| Sbjct 2912492 ACGGTGAGCAGTCTCTTCAACAGACCATCATAGGCCTTGCTCAGAACTTTGTGGGTTCAA 2912551 Query 280053 ACAACTTAAATCTGCTTTCA-CCAAATGGTCAATTTGGTTCTCGTATTCACAATGGAAAA 280111 ||||| | || |||||| | || | ||| | || |||||||| || | ||| Sbjct 2912552 ACAACATCAA-CTGCTTGGAGCCCAGTGGAAACTTCGGTTCTCGACTTGCCGGTGGCTCT 2912610 Query 280112 GATCATGGTAGTGCTCGTTACAT 280134 ||| || ||| |||||||||| Sbjct 2912611 GATGCTGCCAGTCCTCGTTACAT 2912633 >seq96 Length=4151235 Score = 86.0 bits (94), Expect = 1e-11 Identities = 110/150 (73%), Gaps = 4/150 (3%) Strand=Plus/Minus Query 352851 TTGGAGACAAGTTCGCTTCTCGATCTGCTCAAAAAGGAACAATTGGAATGTTGCTCAGTG 352910 |||| |||||||| |||||||| | |||||| || || ||||| |||| | | | Sbjct 473244 TTGGTGACAAGTTTGCTTCTCGTCACGGTCAAAAGGGTACCATTGG--TGTTACCTATCG 473187 Query 352911 AAA--AGGATATGCCTTTCGACAAAAATGGCTTAAAACCTGACATTATTATTAATCCAAA 352968 | | |||||||||||||| || | | ||| | | || || |||||||| || || | Sbjct 473186 ACAGGAGGATATGCCTTTCAGCAGAGAAGGCCTGACTCCCGATATTATTATCAACCCTCA 473127 Query 352969 TGCGATTCCCTCTAGAATGACAATAGCTCA 352998 || ||||||||| |||||||||| || || Sbjct 473126 CGCCATTCCCTCTCGAATGACAATTGCCCA 473097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186811203365905