Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769305.1_202014-10-10] 105 sequences; 42,707,783 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq20 251 8e-62 seq14 120 4e-22 seq53 113 5e-20 >seq20 Length=4904830 Score = 251 bits (278), Expect = 8e-62 Identities = 943/1452 (65%), Gaps = 69/1452 (5%) Strand=Plus/Minus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGG--AAGACATTGATTCTG 104279 || ||| ||||| ||||||| ||| | || ||||| |||||| | || ||||| || Sbjct 1800161 CCTCAGCACATGATCATGCGTGTGTCTATTGGTAT--ATGGGGTGATGATATTGAGCGTG 1800104 Query 104280 TCTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCT 104337 |||||||||||||| || |||||| |||| | | ||| || || | || ||||| Sbjct 1800103 TCTTGGAGACATACAACCTTATGTCCAGCAAGTTCT--TCACCCATGCTTCCCCCACCCT 1800046 Query 104338 CTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGA 104397 |||||| |||||||| || |||||| | ||| |||||| | | | | ||||| Sbjct 1800045 CTTCAACGCTGGTACCCCTCAACCCCAGCTTTCCTCATGCTTCTTGGTTGATATGAAGGA 1799986 Query 104398 GGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGC 104457 |||| || |||||||||||| || || | | ||||| || || ||| ||| Sbjct 1799985 GGACAGCATTGACGGTATCTATGATACCCTCAAGACCTGTGCCATGATTTCCAAGATGGC 1799926 Query 104458 TGGGGGTATTGGG----ATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGG 104513 ||| |||||||| |||| || | | ||| ||| | || ||| | Sbjct 1799925 TGGTGGTATTGGTCTCAATGCCCACCGAATCCGTG----CCACTGGCTCCTACATTGCTG 1799870 Query 104514 GGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGC 104573 | || || ||| ||| | ||| || |||| ||||| || || || ||| ||| || | Sbjct 1799869 GTACCAACGGTACATCCAACGGTGTTGTTCCTATGCTACGTGTCTTCAACAACACTGCCC 1799810 Query 104574 GCTATGTAAATCAAGCTGGGCGT---CGAAAGGGATCTATCGCAGTCTATCTTGAGCCAT 104630 |||| || |||| | ||| ||| || || | || |||| |||||||| | Sbjct 1799809 GCTACGTTGATCAGGGTGGTAACAAGCGACCTGGTGCTTTTGCTATCTACCTTGAGCCTT 1799750 Query 104631 GGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGC 104690 ||||||| ||| || | ||||||||||| | || ||||| ||| | ||||||| | Sbjct 1799749 GGCACGCTGATGTCTTTGAGTTCCTTGATCTCCGAAAGAACCACGGTAAGGAGGAGGTCC 1799690 Query 104691 GGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGG 104750 | |||||| || ||| || |||||||| || || || ||||||||| | |||||| Sbjct 1799689 GCGCCCGCGACCTGTTCCTGGCCCTCTGGATCCCTGACCTTTTCATGAAGCGTGTTGAGA 1799630 Query 104751 AGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGG 104810 ||| || | ||| | ||| | || || || || |||||||| |||| | | Sbjct 1799629 AGAACGGAGAGTGGACCCTCATGTGCCCCAACGAGTGCCCTGGTCTTGCCGACTGCTACG 1799570 Query 104811 GTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGG 104870 |||| |||||||| ||||| ||| ||||||||| |||||| || | | || | | Sbjct 1799569 GTGAAGAGTTTGAGGCCCTCTACGAGAAGTACGAGAGGGAAGGTAAGG-GTC-GCAA--G 1799514 Query 104871 TGCCAGC--TGCC--GATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTAC 104925 | ||| | ||| || | | ||| | || || ||| || | || |||||||| || | Sbjct 1799513 T-CCATCAAGGCCCAGAAGCTTTGGTATGCCATCCTCGAGGCCCAGACCGAGACCGGAAA 1799455 Query 104926 ACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGT 104985 || | |||||||||||| || |||||||||| ||||| || || ||||| | || Sbjct 1799454 CCCCTTCATGCTTTACAAGGATGCCTGTAACCGCAAGAGCAACCAGAAGAACCTCGGCAC 1799395 Query 104986 GATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGC 105045 ||| || || ||||| || || || ||| | || | | | |||||| || Sbjct 1799394 CATCCGAAGCTCTAATCTGTGCACTGAGATCATCGAGTACTGTGCCCCTGATGAGGTCGC 1799335 Query 105046 TGTGTGTAACCTCGCATCAATCGCTCTCCC---------CAAGTATGTGGATCCAGAGAC 105096 ||| || ||||| || || | || || || ||| ||| ||| ||| | Sbjct 1799334 TGTTTGCAACCTTGCCTCCCTTGCCCTGCCTGCTTTCATCAACTAT---GAT---GAGGC 1799281 Query 105097 AAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAA 105156 | ||||| | || || || | || | | ||| | ||| | || Sbjct 1799280 ---TTGCTATGATTTCAAGAAGCTGCATCAGGTCAGTCAGGTTGTTGTCCGCAACTTGAA 1799224 Query 105157 CAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACA 105216 || | || ||| || ||||| || | ||||| || || ||| | || Sbjct 1799223 CAAGATCATCGATGTCAACCACTACCCTGTGCAAGAGGCTCGCAACAGCAACATGCGTCA 1799164 Query 105217 CCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACG 105275 ||| || || ||||| ||||| |||||||| || |||| ||| || || || ||| Sbjct 1799163 CCGACCTATCGGTCTTGGTGTACAGGGTCTTGCTGATGCTTTCCTTGCTCTG-CGCATGC 1799105 Query 105276 CATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACG 105335 | || || || || || | || |||| || || ||||||||||| || |||| Sbjct 1799104 CCTTCGAGTCTCCAGAGGCTAGAGAGCTCAACAAGCAGATCTTTGAGACCATCTACCACG 1799045 Query 105336 CCGCTCTTGAGGC--GAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGA 105393 | || || || || | ||||||| ||| || ||||| || ||||| | Sbjct 1799044 CTGCCCTCACTGCCTCCGTGC--AGTTGGCCAAGGAGGAGGGTCCCTACTCTACCTTCAA 1798987 Query 105394 GGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAG-C 105452 ||||||||| || || | || | || || || || |||| |||| || |||| | Sbjct 1798986 GGGTTCTCCCGCCTCTGAGGGTATCCTCCAGTTCGACATGT-GGAACGT-----CAAGCC 1798933 Query 105453 TTC--AC---TACGACTGGGA-AGCTCTCAAG-GAACGCATCAAGGAGAAGGGTCTTCGT 105505 ||| || | |||||||| ||| || || | | | | ||| | ||| | ||| Sbjct 1798932 TTCCGACCTTTGGGACTGGGAGAGCCTTCGAGAGGATG--TTAAGACTCACGGTATCCGT 1798875 Query 105506 AACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAAT 105565 |||||||| ||| | || || ||||| || ||| ||| | || || ||||||| || Sbjct 1798874 AACAGTCTGCTCCTTGCCCCTATGCCTACTGCCAGTACCTCGCAGATTCTGGGTAACAAC 1798815 Query 105566 GAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTT 105625 || ||||| || || ||||| | ||||| || | | | || ||| || || ||||| Sbjct 1798814 GAGTGCTTCGAGCCTTACACCTCCAACATTTACCAGCGCCGAGTCCTTGCTGGTGAGTTC 1798755 Query 105626 GTGATTGTCAAC 105637 | |||||||| Sbjct 1798754 CAGGTTGTCAAC 1798743 >seq14 Length=1508566 Score = 120 bits (132), Expect = 4e-22 Identities = 351/524 (67%), Gaps = 15/524 (3%) Strand=Plus/Plus Query 94441 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGACTCTAAATGAA 94500 |||||||| || ||| | |||||||| |||||| | |||||||||| | | ||| Sbjct 135106 TGGACTGCCGAGGAGATTGATCTCTCCAAGGATCTCCACGATTGGAACAACCGTC-TGAC 135164 Query 94501 AA-TGAAAAGAAATTCATAAAAT---ACATCCTGGCATTCTTTGCTGGATCCGATGGAAT 94556 | ||| || | ||| | | | ||||||| || ||||| |||| || ||||| || Sbjct 135165 CACTGACGAGCAGTTCTTCATCTCTCACATCCTTGCCTTCTTCGCTGCTTCTGATGGCAT 135224 Query 94557 TGTTTTTGAGAATATCAATAA-CAACTTTGCTGATGAGGTGCA-ATCCTCTGAAGCGAGA 94614 ||| ||||| || | | | | | || | ||||| || |||| |||| || || Sbjct 135225 TGTCAACGAGAACCTCGTTGAGCGATTCAGCGGC-GAGGTCCAGATCC-CTGAGGCTCGA 135282 Query 94615 TCCTTCTATGCGTATCAGTGTCATAATGAA-ATGGTGCATGGGGAGACATACAGTAAACT 94673 | |||||| | | || |||| ||| | | | || ||||| || || Sbjct 135283 TGCTTCTACGGATTCCAAA-TCATGATGGAGAATATTCACTCCGAGACCTATTCCCTGCT 135341 Query 94674 CATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGC-AGCTCTTTGAAGCCATCCAAA 94732 ||| |||| || || ||||| ||| || ||| | | ||||| | || | | | Sbjct 135342 CATTGACACCTACATCAAGGAGCCTGCCCAGC-GAACCTACCTCTTCAACGCTGTTGATA 135400 Query 94733 CAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCG 94791 | |||| || || | |||||| || || ||||| || ||| | | |||| | | Sbjct 135401 CCATTCCCTGCATCCGAAAGAAGGCTGACTGGGCCATTCGATGGATCCAGGACAAGGACT 135460 Query 94792 CGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGT 94851 | | ||||||| | || || | || || || ||| ||||||||||||||| ||| Sbjct 135461 C-TACCTTTGCCCAACGTCTGGTTGCCTTCGCTGCTGTCGAGGGTATCTTCTTCAGCGGT 135519 Query 94852 TCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCC 94911 |||| | | || | |||||||||||||| || |||||||| ||| | ||||||| Sbjct 135520 GCCTTTGCCTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCCGGTTTGACCTTCTCC 135579 Query 94912 AACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 |||||||| ||||||||||||||||| || ||| || ||||| Sbjct 135580 AACGAGCTCATCTCTCGTGACGAGGGCCTTCACACCGACTTTGC 135623 >seq53 Length=1666795 Score = 113 bits (124), Expect = 5e-20 Identities = 208/295 (71%), Gaps = 14/295 (5%) Strand=Plus/Minus Query 9703 GGCATCAATCTCATCAATGAAGACGATGCATGG----TTGATTTTCGCGAGCGACTTCAA 9758 |||||||| |||||||||||||| || | || ||| | || ||| || | | || Sbjct 1330244 GGCATCAAGTTCATCAATGAAGACAATAGAGGGAGACTTGTTCTTGGCG-GC-AGT--AA 1330189 Query 9759 AGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGG 9818 |||| || || || |||||||| || |||||||| || ||||| |||| || | || | Sbjct 1330188 AGAGTTCACGGACTCGCTTGGCTCCAACACCAACGAAGATCTCGTCAAA-TTCACTGCCG 1330130 Query 9819 AACAT-TGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTA 9877 |||| | || ||| || ||| || |||||| |||| ||||| ||||| || |||||| Sbjct 1330129 GACATGTAGAAGAACGGAACACCAGCTTCACCAGCAACAGCTCGAGCGAGGAGCGTCTTA 1330070 Query 9878 CCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC-ACTTC-CAA 9935 || ||||| || ||| | |||||| |||| |||| ||||| || | || | | Sbjct 1330069 CCGGTACCAGGAGGACCGACCAGGAGGACACCCTTGGGAAGTTTGGCACCGAGGTCGCTA 1330010 Query 9936 AGTATCTCTCAGGTTGCTTAAGAAAATCCACAATTTCTTCCAATTCATCTTTGGC 9990 | | | ||||| | ||| ||||| || || | ||| | | ||| || ||||| Sbjct 1330009 A--ACTTTTCAGGGTTCTTCAGAAACTCGACGACTTCCTGGAGTTCCTCCTTGGC 1329957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260034470200