Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769305.1_202014-10-10] 105 sequences; 42,707,783 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq17 93.3 3e-14 >seq17 Length=3294471 Score = 93.3 bits (102), Expect = 3e-14 Identities = 202/295 (68%), Gaps = 17/295 (6%) Strand=Plus/Plus Query 29530 GTGAGGGTCGTAGCCCTCCAGGGAGAAATCCTCTGCCTTAAAGTCGTCCAGGCTCTCCAC 29589 ||||||||| || |||| | || |||||| ||||| || | |||| | ||| ||||| Sbjct 300562 GTGAGGGTCATAACCCTTGACGGTGAAATCTTCTGCTTTCCAACCGTCAATGCT-TCCAC 300620 Query 29590 CCTCCTGTTTATC-------CTC-AG-TGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTG 29640 || ||| || ||| || | |||||| | || ||||| | ||| || || Sbjct 300621 TCT----TTTCTCGAGAAATCTCTAGCTCTGGGAA-GTCTCGCGGCTCGCGCTCCAGTTG 300675 Query 29641 AATCCTCAGCGGTTCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGTGGACAA- 29699 ||| | || | || |||||||| ||||| || |||||||| |||| ||| || Sbjct 300676 GATCTTAAGAGCATCAACGTGGTCGAGGTACACATGAGCATCACCCATAACATGGGTAAG 300735 Query 29700 ACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGG 29759 ||| ||| || | || | ||||| || | ||||| || | || | ||| || | Sbjct 300736 ACT-TCCAGGAACCAGGTCACAAACGTGCGCAAGCATGTGTGTCAATAGGGCGTAACTAG 300794 Query 29760 CGATGTTAAAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCA 29814 | ||||| ||||| || ||||| |||||||| | ||||||||||| | ||| || Sbjct 300795 CAATGTTGAAGGGAACACCGAGACCCATGTCGCAAGACCTCTGGTACAACTGACA 300849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406162680238030