Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20avenaceum_20[genbank_20GCA_5F000769305.1_202014-10-10] 105 sequences; 42,707,783 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq17 91.5 1e-13 >seq17 Length=3294471 Score = 91.5 bits (100), Expect = 1e-13 Identities = 201/294 (68%), Gaps = 17/294 (6%) Strand=Plus/Plus Query 27025 TGAGGGTCGTAACCCTCCAGGGAGAAATCCTCTGCCTTAAAGTCGTCCAGGCTCTCCACC 27084 |||||||| ||||||| | || |||||| ||||| || | |||| | ||| ||||| Sbjct 300563 TGAGGGTCATAACCCTTGACGGTGAAATCTTCTGCTTTCCAACCGTCAATGCT-TCCACT 300621 Query 27085 CTCCTGTTTATC-------CTC-AG-TGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGA 27135 || ||| || ||| || | |||||| | || ||||| | ||| || || Sbjct 300622 CT----TTTCTCGAGAAATCTCTAGCTCTGGGAA-GTCTCGCGGCTCGCGCTCCAGTTGG 300676 Query 27136 GTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAA-A 27194 |||| || | || ||||| || ||||| || ||||| || |||| ||| || | Sbjct 300677 ATCTTAAGAGCATCAACGTGGTCGAGGTACACATGAGCATCACCCATAACATGGGTAAGA 300736 Query 27195 CTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGC 27254 || ||| || | || | ||||| || | ||||| || | || | ||| || || Sbjct 300737 CT-TCCAGGAACCAGGTCACAAACGTGCGCAAGCATGTGTGTCAATAGGGCGTAACTAGC 300795 Query 27255 GATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACA 27308 ||||| ||||| || ||||| |||||||| | ||||||||||| | |||||| Sbjct 300796 AATGTTGAAGGGAACACCGAGACCCATGTCGCAAGACCTCTGGTACAACTGACA 300849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369506727146255