Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20azukicola_20[genbank_20GCA_5F001680625.1_202016-07-06] 32,428 sequences; 51,307,981 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq4461 116 4e-21 >seq4461 Length=4022 Score = 116 bits (128), Expect = 4e-21 Identities = 368/565 (65%), Gaps = 13/565 (2%) Strand=Plus/Plus Query 16961 AGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTC 17020 || ||||| || ||| || | |||||||| | ||| || ||||| ||||| ||| Sbjct 1506 AGGCATGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTC 1565 Query 17021 AACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAG 17080 | || ||||| || || ||||| | ||| || || | ||| || | || ||| Sbjct 1566 AGGCCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAG 1625 Query 17081 AATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTA 17140 || |||||||| |||| ||||| |||| | || | || | | || || |||| Sbjct 1626 AAGATACCCTCAACGGCAGCAAAGGCGACGAGACGCTGAGCAAAGGACGAGTTCTTGTCC 1685 Query 17141 CGAATCCATTTCTGCACCCACTCGGCTTT-TTGCTTTATGCAATCCATCGTTTCTATGGC 17199 | |||||| |||| ||||| || |||| ||||| || || || ||||| Sbjct 1686 TGGATCCATCGGATGGCCCAGTCGGCCTTCTTGCGG-ATGCAGGGGATGGTCTCAATGGC 1744 Query 17200 CTTAAATAATTTCTCTTTTTCCTGTAGG-TCGATTATATACGTATCGATGAGTAGGCTGT 17258 || || | | | || | ||| || | || || || || ||||| || || Sbjct 1745 GTTGAAGAGGTAGGTTCGTTGA-GCAGGCTCCTTGATGTAGGTGTCAATGAGGAGCGAGT 1803 Query 17259 ACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCG 17318 | | |||||||| ||||||||||| ||||| || ||||| ||||||||||| || | Sbjct 1804 AGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGGGCCTCGG 1863 Query 17319 CTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCG 17378 || || || || || |||||| || | || || ||||| ||||||||||| | Sbjct 1864 GGATCTGGACCTCGCCGCTGAATCGCTCGACAAGGTTCTCGTTGACGATGCCGTCAGAGG 1923 Query 17379 CGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGTCCGGTGTAAGAACGCG-- 17436 | ||||| || || | || || | ||| | | ||||| | || || ||| Sbjct 1924 CAGCGAAGAAGGCGAGGATGTGGGAGACGAAGAACTGCTCGTCGGCAGTCAG---GCGGT 1980 Query 17437 ----CCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCA 17492 |||||| | | ||| ||||||| ||| | || |||| ||||| ||| ||| Sbjct 1981 TGTTCCAGTCGTGGAGATCCTTGGATAGATCAATCTCCTCGGCAGTCCAGAAAGAGGCCT 2040 Query 17493 CTGCCTTTTTATACATATTCCAAAT 17517 | ||||| || ||||| | ||| || Sbjct 2041 CAGCCTTCTTGTACATCTGCCAGAT 2065 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517335812891040