Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20azukicola_20[genbank_20GCA_5F001680625.1_202016-07-06]
32,428 sequences; 51,307,981 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq4461 116 4e-21
>seq4461
Length=4022
Score = 116 bits (128), Expect = 4e-21
Identities = 368/565 (65%), Gaps = 13/565 (2%)
Strand=Plus/Plus
Query 16961 AGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTC 17020
|| ||||| || ||| || | |||||||| | ||| || ||||| ||||| |||
Sbjct 1506 AGGCATGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTC 1565
Query 17021 AACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAG 17080
| || ||||| || || ||||| | ||| || || | ||| || | || |||
Sbjct 1566 AGGCCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAG 1625
Query 17081 AATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTA 17140
|| |||||||| |||| ||||| |||| | || | || | | || || ||||
Sbjct 1626 AAGATACCCTCAACGGCAGCAAAGGCGACGAGACGCTGAGCAAAGGACGAGTTCTTGTCC 1685
Query 17141 CGAATCCATTTCTGCACCCACTCGGCTTT-TTGCTTTATGCAATCCATCGTTTCTATGGC 17199
| |||||| |||| ||||| || |||| ||||| || || || |||||
Sbjct 1686 TGGATCCATCGGATGGCCCAGTCGGCCTTCTTGCGG-ATGCAGGGGATGGTCTCAATGGC 1744
Query 17200 CTTAAATAATTTCTCTTTTTCCTGTAGG-TCGATTATATACGTATCGATGAGTAGGCTGT 17258
|| || | | | || | ||| || | || || || || ||||| || ||
Sbjct 1745 GTTGAAGAGGTAGGTTCGTTGA-GCAGGCTCCTTGATGTAGGTGTCAATGAGGAGCGAGT 1803
Query 17259 ACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCG 17318
| | |||||||| ||||||||||| ||||| || ||||| ||||||||||| || |
Sbjct 1804 AGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGGGCCTCGG 1863
Query 17319 CTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCG 17378
|| || || || || |||||| || | || || ||||| ||||||||||| |
Sbjct 1864 GGATCTGGACCTCGCCGCTGAATCGCTCGACAAGGTTCTCGTTGACGATGCCGTCAGAGG 1923
Query 17379 CGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGTCCGGTGTAAGAACGCG-- 17436
| ||||| || || | || || | ||| | | ||||| | || || |||
Sbjct 1924 CAGCGAAGAAGGCGAGGATGTGGGAGACGAAGAACTGCTCGTCGGCAGTCAG---GCGGT 1980
Query 17437 ----CCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCA 17492
|||||| | | ||| ||||||| ||| | || |||| ||||| ||| |||
Sbjct 1981 TGTTCCAGTCGTGGAGATCCTTGGATAGATCAATCTCCTCGGCAGTCCAGAAAGAGGCCT 2040
Query 17493 CTGCCTTTTTATACATATTCCAAAT 17517
| ||||| || ||||| | ||| ||
Sbjct 2041 CAGCCTTCTTGTACATCTGCCAGAT 2065
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517335812891040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |