Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20azukicola_20[genbank_20GCA_5F001680625.1_202016-07-06] 32,428 sequences; 51,307,981 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq4461 140 4e-28 >seq4461 Length=4022 Score = 140 bits (154), Expect = 4e-28 Identities = 369/558 (66%), Gaps = 8/558 (1%) Strand=Plus/Plus Query 24135 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 24194 ||||| || ||| ||| ||||||||||| | | || | ||||||||||| || || Sbjct 1509 CATGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGG 1568 Query 24195 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 24254 || ||||| ||||||||||| || ||||| || ||||| ||||| | || ||||| Sbjct 1569 CCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAG 1628 Query 24255 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATA--ACCGGCGC-TGTCATGT 24311 || || || || || |||||||| | || | | || | || | | |||| || Sbjct 1629 ATACCCTCAACGGCAGCAAAGGCGACGAGACGCTGAGCAAAGGACGAGTTCTTGTCCTGG 1688 Query 24312 ATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATT 24370 ||||| | || ||||| ||||||||||| | || || || ||||| || || || Sbjct 1689 ATCCATCGGATG-GCCCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTCTCAATGGCGTT 1747 Query 24371 AAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACAT 24430 ||||| ||| || || | | || || | || || ||||| | || || | Sbjct 1748 GAAGAGGTAGGTTCGTTGAGCAGGCTCCTTGATGTAGGTGTCAATGAGGAGCGAGTAGGT 1807 Query 24431 TTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 24490 || || || ||||| || || || || || |||||||| |||| ||||||| || Sbjct 1808 CTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGGGCCTCGGGGAT 1867 Query 24491 CTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGC 24550 ||| || || | ||||| || | | || || || || || |||||| ||| || Sbjct 1868 CTGGACCTCGCCGCTGAATCGCTCGACAAGGTTCTCGTTGACGATGCCGTCAGAGGCAGC 1927 Query 24551 AAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTA---GTTTATTCCA 24607 || || || | | || | || | | ||||| | || | | || ||||| Sbjct 1928 GAAGAAGGCGAGGATGTGGGAGACGAAGAACTGCTCGTCGGCAGTCAGGCGGTTGTTCCA 1987 Query 24608 ATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 24667 || | || ||| || |||| ||| | || || | ||||| || || ||||| ||||| Sbjct 1988 GTCGTGGAGATCCTTGGATAGATCAATCTCCTCGGCAGTCCAGAAAGAGGCCTCAGCCTT 2047 Query 24668 TTTATACATATTCCAGAT 24685 || ||||| | |||||| Sbjct 2048 CTTGTACATCTGCCAGAT 2065 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593480934949440