Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20azukicola_20[genbank_20GCA_5F001680625.1_202016-07-06] 32,428 sequences; 51,307,981 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq8425 152 6e-32 seq11788 91.5 2e-13 >seq8425 Length=2318 Score = 152 bits (168), Expect = 6e-32 Identities = 348/528 (66%), Gaps = 43/528 (8%) Strand=Plus/Minus Query 145690 TCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCG 145749 |||||||||| ||||||||||||||| || |||| |||||| ||| | || ||| | Sbjct 561 TCCACGTGGTCGAGGTAGACGTGCGCATCGCCCATGACGTGAGTGAGGCTGCCAGGCACC 502 Query 145750 AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809 | | || ||| || | ||||| |||||||| | ||||||||| |||||||| || Sbjct 501 AATTCGCAGACGTGCGCCATCATGTGTGTCAGCAGTGCGTAGCTGGCAATGTTGAACGGG 442 Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAG-------------GAG-- 145854 || || || |||||||| | || |||||||| ||||||||| ||| Sbjct 441 ACGCCGAGACCCATGTCGCAGGATCGCTGGTAGAGCTGGCAGTGCAGGTGGCCCTGAGGC 382 Query 145855 ---------AGCTCCCCGCCC---------------GCCACGTAGAACTGGCACAGGAGG 145890 |||| || || | |||||||||||| | | | Sbjct 381 TTGGCATCTGGCTCGTCGTCCTTTCGTCGAGGGTAGGAGACGTAGAACTGGGCAAACATG 322 Query 145891 TGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGC 145950 ||||| || || ||| |||| ||| || || ||||||||||||| || | || Sbjct 321 TGGCATGGGGGGAGGACCATTTTCTTCAGATCGGCGGGGTTCCAGGCGGAAAGAATCAGG 262 Query 145951 CTCCTGCTC-TCGGGGTTCCTCTTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCC 146009 | | | || | ||| | | | || || | || ||||||||| ||||| Sbjct 261 CGGC-GATCGTACGGGCTGGTGCGCAGCTTGTGAATAATCTCGGCGAGCTGGTCGACGCC 203 Query 146010 CTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAA 146069 || ||| ||| || ||||||| || |||||| |||| || ||||| | ||| ||||| Sbjct 202 CTTGCCCGTGTAGTCCGTCTTGGCATCAACGTACTCGGCGCCAAAGTGTCGCCATTGGAA 143 Query 146070 CCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAA 146129 ||||| ||||| || || || ||| ||| | ||| || ||| | ||||||| Sbjct 142 GCCGTACACGGGGCCGAGATCGCCGACCTCGCGGTGGTTGAGGCCGAGGTTGTCGAGGAA 83 Query 146130 GTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CCTCGCGGAG 146175 || ||||| || ||| ||||||||||||||| ||| |||||| ||| Sbjct 82 CTCGCGGGAGCCATTGCCGTCCCAGATCTTGATGCCGGCCTCGCTGAG 35 >seq11788 Length=1640 Score = 91.5 bits (100), Expect = 2e-13 Identities = 110/146 (75%), Gaps = 4/146 (3%) Strand=Plus/Plus Query 146123 CGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CCTCGCGGAGAGCTC 146180 ||||||| || ||||| || ||| ||||||||||||||| ||| |||||| ||| ||| Sbjct 34 CGAGGAACTCGCGGGAGCCATTGCCGTCCCAGATCTTGATGCCGGCCTCGCTGAG-GCT- 91 Query 146181 ATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAA 146240 ||||| ||| ||| |||||||||||| ||||| ||| ||| | | ||| Sbjct 92 GGTGGAGGATGTGTTGCCCTCGATGAACCAGAGGAGCTCGGCGATGACGGCGCGGGTGAA 151 Query 146241 GACCCTCTTGGTGGTCAGCAGGGGGA 146266 ||| | ||||||||| || ||||||| Sbjct 152 GACGCGCTTGGTGGTGAGGAGGGGGA 177 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589837612369120