Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20azukicola_20[genbank_20GCA_5F001680625.1_202016-07-06] 32,428 sequences; 51,307,981 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq10759 123 2e-23 seq1209 123 2e-23 seq3577 104 2e-17 seq10395 102 5e-17 >seq10759 Length=1737 Score = 123 bits (136), Expect = 2e-23 Identities = 142/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| ||||||||||||||||| || |||| |||| |||||| || || || Sbjct 1160 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCGTCTTCCAGCTGCTTACCAGCAAAG 1219 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || || ||||||||||| ||| | || ||||||||| ||||| ||| | | | Sbjct 1220 ATAAGTCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGAATCTTGGACTTCACGTTG 1279 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | |||| |||| || || || | |||||||| || || |||||||| || ||| Sbjct 1280 TCAATGGTATCGCTCGACTCCACCTCTAGAGTGATGGTCTTTCCAGTGAGAGTCTTGACA 1339 Query 34379 AAGATCTGCAT 34389 ||||||||||| Sbjct 1340 AAGATCTGCAT 1350 Score = 93.3 bits (102), Expect = 3e-14 Identities = 152/217 (70%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCG--G 34220 || |||||||| | || |||||||| | ||| || ||||| |||||||||||| | Sbjct 1352 CCACCGCGCAGACGAAGAACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTG 1411 Query 34221 ACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGG 34280 | || | ||| |||| || | ||||||||| |||||||| || ||||||||||| | Sbjct 1412 AGAGTT--CGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCAGGAG 1469 Query 34281 GCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGA 34340 | | | |||||| || ||||| ||| | | | | |||| |||| || || | Sbjct 1470 GAATACCCTCCTTATCTTGGATCTTCGACTTGACGTTGTCGATCGTGTCGGAAGACTCCA 1529 Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | || | ||||| || || || ||||| || || || Sbjct 1530 CCTCGAGGGTGATAGTCTTACCAGTGAGGGTCTTGAC 1566 >seq1209 Length=9026 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | || |||||||| | || || || ||||| |||||||||||| | Sbjct 5266 CCACCACGCAGGCGGAGGACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 5325 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || || | ||||||||| || || ||||| |||||||||||| ||| Sbjct 5326 AGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGTCGCTGCTGGTCGGGGGGG 5385 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | | | | || | |||| || || || Sbjct 5386 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 5445 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | ||||| || || || ||||| || || ||||||||||||||| Sbjct 5446 TCGAGGGTGATTGTCTTCCCCGTGAGGGTCTTGACAAAGATCTGCATC 5493 >seq3577 Length=4491 Score = 104 bits (114), Expect = 2e-17 Identities = 123/167 (74%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| ||||||||||||||||| ||| | || || | ||||||||| |||||| Sbjct 23 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAA 82 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || || |||||||||||| ||| | || ||||||||| ||||| ||| | || | Sbjct 83 ATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCTTCGACTTGACATTG 142 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGT 34365 | || | ||| | || ||||| || | || ||||| ||||| || Sbjct 143 TCGATGGTATCCGAGGACTCGACCTCGAGGGTAATGGTCTTGCCCGT 189 >seq10395 Length=1652 Score = 102 bits (112), Expect = 5e-17 Identities = 130/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 34202 TTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATG 34261 ||||| |||||||||||||| || ||| | || |||| ||||||||| ||||| || Sbjct 351 TTCTGGATGTTGTAGTCGGAAAGGGTTCGGCCATCCTCCAGCTGCTTGCCAGCGAAGATC 292 Query 34262 AGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCT 34321 || ||||||||||| ||| | || ||||||||| ||||| ||| | || | | Sbjct 291 AGTCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCA 232 Query 34322 ATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAA 34380 || | || | || ||||| || | |||||||| ||||| || || || ||||| || Sbjct 231 ATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 173 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 322944316695680