Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20azukicola_20[genbank_20GCA_5F001680625.1_202016-07-06] 32,428 sequences; 51,307,981 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq7211 138 2e-27 seq10402 96.9 7e-15 seq1130 95.1 3e-14 >seq7211 Length=2767 Score = 138 bits (152), Expect = 2e-27 Identities = 413/630 (66%), Gaps = 17/630 (3%) Strand=Plus/Minus Query 248818 TACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAG 248877 ||| | | ||||| ||||| || || ||| ||| || |||||||| |||||||||||| Sbjct 1812 TACCAGTACTTTGGCTTCAAGACTCTTGAGCGATCCTACCTCCTCAAGATTGATGGCAAG 1753 Query 248878 ATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGAC 248937 || || || || ||||||||| | ||||| ||| ||||||| || | || |||| Sbjct 1752 ATTGTTGAGCGTCCCCAGCACATGATCATGCGTGTGTCTGTCGGCAT---CTGGGGTGAC 1696 Query 248938 -ATAGAGAGCGTG--CTCGAGACGTACACCGGAATG-AGTGAACGCTGGATGACACATGC 248993 ||| ||||||| || ||||| |||| | ||| | | | | | | || ||||| Sbjct 1695 GATATTGAGCGTGTTCTGGAGACCTACAACCTCATGTCGAGCAAG-TTCTTCACCCATGC 1637 Query 248994 CACACCGACGCTCTTCAACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCT 249053 | | || || |||||||| || ||||| | | ||||||| ||| ||||| || | Sbjct 1636 CTCCCCCACCCTCTTCAATGCTGGTACTCCCCAGCCTCAGCTGTCCTCATGCTTCCTGGT 1577 Query 249054 TGCCATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGAC---GGCGAA 249110 | |||| |||| ||| | || || |||||||| || || | |||| || | Sbjct 1576 CGACATGAAAGAGGACAGCATTGAGGGTATTTATGATACTCTCA---AGACCTGTGCCAT 1520 Query 249111 GATTTCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTC 249170 ||| || || | ||||| || ||||| || |||| | ||||| || | || || Sbjct 1519 GATCTCCAAGATGGCGGGTGGTATCGGCCTGAACGTCCACCGAATCCGTGCCACTGGCTC 1460 Query 249171 GTACATCAAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGA 249230 |||||| ||||| || || | | ||| || ||| | ||||| ||| | Sbjct 1459 TTACATCGCTGGTACCAACGGTACCTCCAACGGTGTCACTCCCATGCTTCGTGTCTTCAA 1400 Query 249231 GTCCACCGCCAGGTTCATCAACCAGGCCGGGCGC---CGAAAGGGGTCGTTCGCCATGTA 249287 ||| ||| ||| | || |||||| || | ||| || | || ||||| || Sbjct 1399 CAACACTGCCCGGTACGTCGACCAGGGTGGCAACAAGCGACCTGGTGCCTTTGCCATCTA 1340 Query 249288 TTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAA 249347 | || |||||||| ||| | || |||||||| ||| || |||||| ||||||| Sbjct 1339 CCTTGAGCCCTGGCACGCAGATGTCTTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAA 1280 Query 249348 CGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCG 249407 ||| | | || || ||||| ||| | || ||| | |||| | |||||| Sbjct 1279 GGAGGAGGTCCGCGCCCGCGACCTGTTCCTGGCTCTCTGGATTCCCGATCTCTTCATGAA 1220 Query 249408 CCGCGTCAAGGCCGACGGCGATTGGACGCT 249437 || ||| || |||| || ||||| || Sbjct 1219 GCGTGTCGAGAAGAACGGTGACTGGACCCT 1190 >seq10402 Length=1949 Score = 96.9 bits (106), Expect = 7e-15 Identities = 122/168 (73%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 254000 CCTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGC 254059 ||| || ||| | || || |||| ||||| || || ||||||||||| |||||||| || Sbjct 1457 CCTCCCCCATCTCCTCCTCTACGGCCCTCCAGGCACCGGCAAGACGTCGACCATCCTCGC 1516 Query 254060 GCTGGCCCGAACCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGC 254119 || ||||| | | | ||| | |||||| | || ||||||||||| ||||| Sbjct 1517 CCTCGCCCGCCGCATCTATGGCACCGCAAACATGCGCCAGATGGTGCTCGAGCTCAACGC 1576 Query 254120 TTCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTT 254167 || ||||| ||||| | ||||| || || || |||||||||| || Sbjct 1577 CTCGGACGACCGCGGCATCGACGTGGTGCGGGAGCAGATCAAGACGTT 1624 >seq1130 Length=7839 Score = 95.1 bits (104), Expect = 3e-14 Identities = 133/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 254202 TGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAG 254261 || || ||||||||| || | || || |||||||| ||| ||||||| || || ||| Sbjct 3271 TGCCCCCCTTTCAAGATCATCATTCTCGACGAGGCCGACTCCATGACACAAGATGCCCAG 3212 Query 254262 TCCGCCCTCCGCCGAACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGC 254321 ||| || || |||| |||||||| || | | || || || ||| || | ||| Sbjct 3211 AGCGCACTGCGAAGAACAATGGAGACATACAGCAAGATCACTCGCTTCTGCTTGATCTGC 3152 Query 254322 AACTACGTGTCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCAGC 254381 ||||| || | ||||||| |||||| ||| ||| ||| |||||||||||||| Sbjct 3151 AACTATGTCACCCGAATCATCGACCCGCTCGCTAGTCGATGCAGCAAGTTTCGATTCAAG 3092 Query 254382 ACCCTCG 254388 | ||||| Sbjct 3091 AGCCTCG 3085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073320267509504