Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20azukicola_20[genbank_20GCA_5F001680625.1_202016-07-06] 32,428 sequences; 51,307,981 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq7211 302 4e-77 seq4461 172 5e-38 seq10759 102 7e-17 seq1209 93.3 4e-14 seq10395 89.7 5e-13 >seq7211 Length=2767 Score = 302 bits (334), Expect = 4e-77 Identities = 640/951 (67%), Gaps = 8/951 (1%) Strand=Plus/Plus Query 23027 GAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACAT 23086 || ||||| ||||| || || ||||| || || |||||| | ||| ||||| || Sbjct 896 GAAGCAAGGTTGCAGACAGCAACCTCATCGGGGGCGCAGTACTCGATAATCTCGGTGCAG 955 Query 23087 AGATTG---CTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAA 23143 |||||| |||| || ||||||| || |||||||||| || || ||||| Sbjct 956 AGATTGGAGCTACGG---ATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGG 1012 Query 23144 TCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCAC 23203 |||||||| |||||| | || |||| |||||| ||||| ||||| ||| || ||| Sbjct 1013 TCCTTGTAAAGCATGAAGGGGTTGCCGGTCTCGGTCTGCGCCTCGAGGATGGCATACCAG 1072 Query 23204 ATAGTCTGAGCGTGAACACGTCGCACGTACCT-GCCTTCTTCCTCGTACTTTTGGTACAA 23262 | |||| || | | ||| || ||| ||| | | ||| ||||||| ||| | Sbjct 1073 AGCTTCTGGGCCTTCATG-GTCTTGCGACCCTTGCCCGCCTTCTCATACTTTTCGTAAAG 1131 Query 23263 CGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAG 23322 || || || || | || || ||||||||||| ||||| | | | ||||||||||| Sbjct 1132 AGCCTCGAACTCCTCGCCATAGCAGTCGGCCAGACCGGGGCACTCGTTGGGACACATGAG 1191 Query 23323 ACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTA 23382 |||| || || || || || |||| || ||||| || ||||| ||||| Sbjct 1192 GGTCCAGTCACCGTTCTTCTCGACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCCAG 1251 Query 23383 GAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTC 23442 |||||| ||||||||||| |||||||| |||||| |||||| || || | || || Sbjct 1252 GAACAGGTCGCGGGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAACTC 1311 Query 23443 CAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCC 23502 || || || || ||||| ||||| ||||| | |||||| || || |||| ||| ||||| Sbjct 1312 AAAGACATCTGCGTGCCAGGGCTCAAGGTAGATGGCAAAGGCACCAGGTCGCTTGTTGCC 1371 Query 23503 GCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTT 23562 ||||| |||||||| ||||| ||||||||| | || | ||||| || || |||||| Sbjct 1372 ACCCTGGTCGACGTACCGGGCAGTGTTGTTGAAGACACGAAGCATGGGAGTGACACCGTT 1431 Query 23563 GGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAA 23622 ||| | ||| || || | || || | || || | ||| |||| | Sbjct 1432 GGAGGTACCGTTGGTACCAGCGATGTAAGAGCCAGTGGCACGGATTCGGTGGACGTTCAG 1491 Query 23623 ACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCC 23682 || || || || || || || ||||| || || || ||||| || || || || Sbjct 1492 GCCGATACCACCCGCCATCTTGGAGATCATGGCACAGGTCTTGAGAGTATCATAAATACC 1551 Query 23683 CTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGT 23742 ||| |||||||||||||| | |||||| ||| || || |||| || | | ||| || Sbjct 1552 CTCAATGCTGTCCTCTTTCATGTCGACCAGGAAGCATGAGGACAGCTGAGGCTGGGGAGT 1611 Query 23743 AGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTA 23802 | | || ||| || || ||| ||| || || ||| | ||||||| || ||||| Sbjct 1612 ACCAGCATTGAAGAGGGTGGGGGAGGCATGGGTGAAGAACTTGCTCGACATGAGGTTGTA 1671 Query 23803 CGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCAT 23862 || || | | ||||| || || || || |||| | || ||||| ||||| Sbjct 1672 GGTCTCCAGAACACGCTCAATATCGTCACCCCAGATGCCGACAGACACACGCATGATCAT 1731 Query 23863 GTATTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGT 23922 || || || | ||| || | ||| | ||| |||| || || || || | | || Sbjct 1732 GTGCTGGGGACGCTCAACAATCTTGCCATCAATCTTGAGGAGGTAGGATCGCTCAAGAGT 1791 Query 23923 TTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGA 23973 || || ||||| || | || | |||||||| || | || |||||||| Sbjct 1792 CTTGAAGCCAAAGTACTGGTATTGGAAGTCACGGTCATAGACAATGGCCGA 1842 Score = 127 bits (140), Expect = 2e-24 Identities = 344/524 (66%), Gaps = 7/524 (1%) Strand=Plus/Plus Query 22145 GTGCGAAGATAATACATGCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGAC 22204 || || || || ||||||||||||||||| || | |||||| || ||| || || Sbjct 14 GTTCGCAGGTAGTACATGCCCGTCTTCAGGCCGAGCTTCCAGCCGGCAAAGTGCATGCTG 73 Query 22205 GTCAATTTTCCATAACTCGGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGATA 22264 || | || || | || | ||||| | |||| ||||| |||||| || Sbjct 74 GTGATCTTGCCCATGGTGGGGTCCTTCATGTGGATGTTGAGGGACTGGGACTGATCAATG 133 Query 22265 AACGCTCCTCGATCGGCGGCCATATTTATCAATGTACGCATCGACATTTCCCATACGGTC 22324 || || ||||| ||||| ||||| | | | ||| ||| || ||||| |||||| Sbjct 134 AAGGCACCTCGGTCGGCAGCCATCTGAACGACCTGGCGCTGCGAAATCTCCCAGACGGTC 193 Query 22325 TTGTACAGTTGCCTGATCTCTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTG 22384 ||||| || | ||| ||| || || ||| |||||| ||| ||||| | | Sbjct 194 TTGTAGAGGGCCTTGACCTCGGCGGGGATGTTGGGGATGTTCTGGATGGAACCGTTCTCG 253 Query 22385 TGTATGATCAAATTTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACC 22444 ||||| ||||| || | ||| ||||| || ||| | | || |||| | Sbjct 254 GCAATGATTCGGTTTTTCATGGCATCCGACCACAGGCCCATGTCAACAAGGTCCTTGAGC 313 Query 22445 AGATGACGGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGAT 22504 || |||| || || || |||||||| | | ||| ||||| ||||| |||||||| Sbjct 314 AGCCAGGGGTTGACGACCTGGAACTCGCCAGCGAGGACACGGCGCTGGTAGATGTTGGAG 373 Query 22505 GTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATC 22564 ||| | || ||||| | || ||||| ||||| ||||| | || || || ||||| Sbjct 374 GTGTAAGGCTCGAAGCACTCGTTGTTGCCCAGGATCTGCGAAGTACTGGCAGTAGGCATA 433 Query 22565 GGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCT--TTGAAATTTTACTCTTGAGCATCG 22622 || || | ||| || ||| | | |||||||| |||| | | | |||| || Sbjct 434 GGGGCAAGCAGCAGACTGTTGCGAATGCCGTGCTCCTTGACCTGCT--CCCTGAGGGTCT 491 Query 22623 ACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCG 22666 ||||||||| || || || ||| ||||||| |||||| ||| Sbjct 492 CCCAGTCCCAGAGGTCAGAAGGCTTCACATT---CCACATGTCG 532 >seq4461 Length=4022 Score = 172 bits (190), Expect = 5e-38 Identities = 554/847 (65%), Gaps = 31/847 (4%) Strand=Plus/Minus Query 57564 CCAGACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTA 57623 ||| | || ||| | |||||||| ||||| || || || || ||||| | ||| || | Sbjct 2071 CCACAGATCTGGCAGATGTACAAGAAGGCTGAGGCCTCTTTCTGGACTGCCGAGGAGATT 2012 Query 57624 GACCTGTCTAAGGATCTGAGCGATTGGGATTCCCTCAAAGAAT-CTGA-GAGAAATTTTA 57681 || || || |||||||| ||| ||| | || | || | | || ||| | || | Sbjct 2011 GATCTATCCAAGGATCTCCACGACTGGAACAACCGCCT-GACTGCCGACGAGCAGTTCTT 1953 Query 57682 --TTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGT 57739 | ||| | | || || ||||| || || || || || || |||||||| | || Sbjct 1952 CGTCTCCCACATCCTCGCCTTCTTCGCTGCCTCTGACGGCATCGTCAACGAGAACCTTGT 1893 Query 57740 CGAAAGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGT 57799 ||| |||| || || || | | ||||| ||||||| ||||| || || | Sbjct 1892 CGAGCGATTCAGCGGCGAGGTCCAGATCCCCGAGGCCCGATGCTTCTACGGCTTCCAGAT 1833 Query 57800 GGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGA 57859 || || ||| | || || || | || ||||| ||||| || || ||| | ||||| Sbjct 1832 CATGATGGAGAACATCCACTCCGAGACCTACTCGCTCCTCATTGACACCTACATCAAGGA 1773 Query 57860 CAACGA-CGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGA 57918 | | | ||| || || |||||||| || || || || ||| ||| ||||| Sbjct 1772 GCCTGCTCAACGAACCTAC-CTCTTCAACGCCATTGAGACCATCCCCTGCATCCGCAAGA 1714 Query 57919 AGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTTC---GCCGAGAGGC 57975 |||| || ||| | ||| |||||| | | || | | ||| | || || | | Sbjct 1713 AGGCCGACTGGGCCATCCGATGGATCCAG---GACAAGAACTCGTCCTTTGCTCAGCGTC 1657 Query 57976 TAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTT 58035 | |||| || || ||||| || ||||| ||||| || |||||| | || || | Sbjct 1656 TCGTCGCCTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCT 1597 Query 58036 GGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCG 58095 || | ||||| || ||||| ||||| |||||||| ||| ||||||| | || || || | Sbjct 1596 GGCTCAAGAAGCGTGGCCTCATGCCTGGCCTGACCTTTTCCAACGAGCTCATCTCTCGTG 1537 Query 58096 ACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCG- 58154 |||||||||| || || || ||||| ||||| | |||| ||| |||| ||| Sbjct 1536 ACGAGGGTCTTCACACCGACTTTGCATGCCTCCTCCACTCCCAC---CTCAA-GGGCCGT 1481 Query 58155 ------ACGCGGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAG 58208 | || || |||| |||||| |||||||| || ||| | || || | ||| Sbjct 1480 GCCAGCAAGCAGG---TCATCCAGGACATCATCACCGATGCCGTCACCATTGAGCAGGAG 1424 Query 58209 TTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAG 58268 || | ||||| ||||| || ||| ||||||| |||||| || | ||| | Sbjct 1423 TTCCTGACCGAGGCCCTCCCCTGCGCCCTGCTCGGCATGAACGCCGACCTCATGAAGCGG 1364 Query 58269 TACATTGAGTTTGTTGCCGACAGACTTTTGCTCGAACT--GATTGGAGAGCGTCATTACA 58326 ||||| ||||| || |||||| | || | ||| || | |||| ||| |||| Sbjct 1363 TACATCGAGTTCGTCGCCGACCGCCTCCTCGTCGCCCTCGGCAACGAGAAGGTC--TACA 1306 Query 58327 ACACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTT 58386 | | | || || || || || ||| | ||||| |||| |||||||| ||||| | Sbjct 1305 AGGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGTGGCAAGACCAACTTCT 1246 Query 58387 TCGAAAA 58393 |||| || Sbjct 1245 TCGAGAA 1239 >seq10759 Length=1737 Score = 102 bits (112), Expect = 7e-17 Identities = 154/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 31203 TCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCG 31262 |||| ||||| || || || || || |||||| |||| || || | ||||||| ||| Sbjct 1568 TCGTCAAGACCCTCACTGGTAAGACTATCACCCTCGAGGTGGAGTCTTCCGACACGATCG 1509 Query 31263 AAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAA 31322 | | ||||| || || || ||||| || | || || ||||||||||| || | Sbjct 1508 ACAACGTCAAGTCGAAGATCCAAGATAAGGAGGGTATTCCTCCTGACCAGCAGCGCCTGA 1449 Query 31323 TATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAG 31382 | ||||| ||||| ||| | || ||| ||| | ||||| || ||||| || || | Sbjct 1448 TTTTCGCCGGCAAGCAGCTCGAGGACGGCCGAACTCTCAGCGACTACAACATCCAGAAGG 1389 Query 31383 AATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 | |||||||| || ||||| ||| | ||| | || |||| Sbjct 1388 AGTCGACTCTGCACCTGGTTCTTCGTCTGCGCGGTGGTA 1350 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || |||||||| || || || || ||||| | || || || || | Sbjct 1350 ATGCAGATCTTTGTCAAGACTCTCACTGGAAAGACCATCACTCTAGAGGTGGAGTCGAGC 1291 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | || | || || | || ||||||||| ||| | || || |||||| Sbjct 1290 GATACCATTGACAACGTGAAGTCCAAGATTCAGGACAAGGAGGGCATCCCCCCTGACCAG 1231 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || || ||||| || ||| |||||||| | || || ||| || ||| Sbjct 1230 CAGCGACTTATCTTTGCTGGTAAGCAGCTGGAAGACGGTCGCACCCTGTCCGACTACAAC 1171 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 || || || || ||||| |||||||| || || | || | |||||| Sbjct 1170 ATCCAGAAGGAGTCGACCCTTCATCTTGTTCTCCGTCTCCGTGGCGGT 1123 >seq1209 Length=9026 Score = 93.3 bits (102), Expect = 4e-14 Identities = 166/242 (69%), Gaps = 4/242 (2%) Strand=Plus/Minus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| || || || ||||| || || || || || |||||| |||| || || | Sbjct 5495 AAGATGCAGATCTTTGTCAAGACCCTCACGGGGAAGACAATCACCCTCGAGGTGGAGTCT 5436 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 ||||||| |||| | ||||| | || ||||||||| ||| | || |||||| Sbjct 5435 TCCGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGAC 5376 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 |||||||| || || || |||||||| ||| | || || || ||||||| || Sbjct 5375 CAGCAGCGACTCATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTAC 5316 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT----AGAAG 31425 ||||| || || || || || || ||||| || | ||| | || ||| ||||| Sbjct 5315 AACATCCAGAAGGAGAGCACCCTCCACCTGGTCCTCCGCCTGCGTGGTGGTGCCAAGAAG 5256 Query 31426 CG 31427 || Sbjct 5255 CG 5254 >seq10395 Length=1652 Score = 89.7 bits (98), Expect = 5e-13 Identities = 108/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 31201 TTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGT 31260 |||||| ||||| ||||| ||||| || |||||| |||| || || | || |||| | Sbjct 172 TTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCAT 231 Query 31261 CGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCT 31320 || | ||||| | || ||||||||| ||| | || || ||||||||||| || Sbjct 232 TGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAGCAGCGACT 291 Query 31321 AATATTCGCTGGCAAACAGTTGGAAGA 31347 || ||||||||||| ||| |||| || Sbjct 292 GATCTTCGCTGGCAAGCAGCTGGAGGA 318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445585708589760