Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20azukicola_20[genbank_20GCA_5F001680625.1_202016-07-06] 32,428 sequences; 51,307,981 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq4461 246 4e-60 seq7211 156 6e-33 >seq4461 Length=4022 Score = 246 bits (272), Expect = 4e-60 Identities = 576/852 (68%), Gaps = 39/852 (5%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| | |||||||| |||||| ||||||| || ||||| | ||| ||| | ||||| Sbjct 2065 ATCTGGCAGATGTACAAGAAGGCTGAGGCCTCTTTCTGGACTGCCGAGGAGATTGATCTA 2006 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAG-AGTTTATA-- 125135 |||||||| || |||| ||| | | || |||||| | || |||| |||| | Sbjct 2005 TCCAAGGATCTCCACGACTGGAACAACCGCCTGACTG---CCGA-CGAGCAGTTCTTCGT 1950 Query 125136 -TCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGA 125193 || ||||| | |||||||| || | ||| || || ||||||||||| || || || || Sbjct 1949 CTCCCACATCCTCGCCTTCTTCGCTGCCTCTGACGGCATCGTCAACGAGAACCTTGTCGA 1890 Query 125194 CACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCA 125253 |||||| ||| | || || |||| ||||| ||||| ||||| |||| Sbjct 1889 G-CGATTCAGCGGCGAGGTCCAGATCCCCGAGGCCCGATGCTTCTACGGCTTCCAGATCA 1831 Query 125254 TGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATC 125313 |||| |||||| | ||||| || | ||||| || ||||||| ||||| || | Sbjct 1830 TGATGGAGAACATCCACTCCGAGACCTACTCGCTCCTCATTGACACCTACATCAAGGAGC 1771 Query 125314 CG---CAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAA 125370 | ||||| | || ||||| ||||| || || || | || | || || || | Sbjct 1770 CTGCTCAACGAACCTAC---CTCTTCAACGCCATTGAGACCATCCCCTGCATCCGCAAGA 1714 Query 125371 AGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGG 125430 |||| | |||| || || |||||| | ||| | || || || | || | | || | Sbjct 1713 AGGCCGACTGGGCCATCCGATGGATCCAGGACAAGAACTCGTCCTTTGCTCAGCGTCTCG 1654 Query 125431 TGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGC 125490 | || || || ||||| ||||| |||||||| ||| ||||| ||||||| |||| Sbjct 1653 TCGCCTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCTGGC 1594 Query 125491 TCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACG 125550 |||||||||| || |||||||| || ||||| |||||| | || ||||| |||| Sbjct 1593 TCAAGAAGCGTGGCCTCATGCCTGGCCTGACCTTTTCCAACGAGCTCATCTCTCGTGACG 1534 Query 125551 AGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAGTGCA 125610 |||| || ||| ||||||| ||| | || | | | | | || | || || Sbjct 1533 AGGGTCTTCACACCGACTTTG-CATGC--CTCCTCCACTCCCACCT------CAAGGGCC 1483 Query 125611 GATCCAGCGATGAAAAGGTCATC---AACATTGTAACCGATGCCGTGAGGATAGAACAAG 125667 | ||||| | |||||||| |||| | ||||||||||| | || || || | Sbjct 1482 GTGCCAGC---AAGCAGGTCATCCAGGACATCATCACCGATGCCGTCACCATTGAGCAGG 1426 Query 125668 AGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATG-TGC 125726 |||| || ||||| |||| || | | || | ||||||||| | | || ||| || Sbjct 1425 AGTTCCTGACCGAGGCCCTCCCCTGCGCCCTGCTCGGCATGAACGCCGACCTCATGAAGC 1366 Query 125727 GAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGC--CG-CAAGATT 125783 | |||||| ||||| || || || || || || || | ||| || ||| | Sbjct 1365 G-GTACATCGAGTTCGTCGCCGACCGCCTCCT---CGTCGCCCTCGGCAACGAGAAGGTC 1310 Query 125784 TACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAAC 125843 ||||| |||| || ||||| || |||||| | ||| || || | || ||||||||| Sbjct 1309 TACAAGGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGTGGCAAGACCAAC 1250 Query 125844 TTTTTCGAGAAG 125855 || ||||||||| Sbjct 1249 TTCTTCGAGAAG 1238 >seq7211 Length=2767 Score = 156 bits (172), Expect = 6e-33 Identities = 307/449 (68%), Gaps = 10/449 (2%) Strand=Plus/Minus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 ||||| ||||| || || || || || | ||| ||||| | || || |||||||| || Sbjct 1377 CAGGGTGGCAACAAGCGACCTGGTGCCTTTGCCATCTACCTTGAGCCCTGGCACGCAGAT 1318 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 || ||||| || | || ||||||| ||| ||| || |||| || ||| | ||| Sbjct 1317 GTCTTTGAGTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGAGGTCCGCGCCCGCGAC 1258 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTC---AACGACGGTGGC 97052 |||| || |||||| | || ||| | ||||||||||| ||| || |||||| Sbjct 1257 CTGTTCCTGGCTCTCTGGATTCCCGATCTCTTCATGAAGCGTGTCGAGAAGAACGGTG-- 1200 Query 97053 TACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAG 97112 |||||| ||| ||||| ||| || || ||||||||| |||| |||| ||||| ||| Sbjct 1199 -ACTGGACCCTCATGTGTCCCAACGAGTGCCCCGGTCTGGCCGACTGCTATGGCGAGGAG 1141 Query 97113 TTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGC-CGATACGTGAGACGAGTCGATGC 97171 || ||||| ||| || ||| | | |||| | || |||| | || | Sbjct 1140 TTCGAGGCTCTTTACGAAAAGTATGAGAAGGCGGGCAAGGGTCGCAAGACCA--TGAAGG 1083 Query 97172 ACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTC 97230 | |||| || ||| | |||||| | ||| ||| ||||| || | || | ||| | Sbjct 1082 CCCAGAAGCTCTGGTATGCCATCCTCGAGGCGCAGACCGAGACCGGCAACCCCTTCATGC 1023 Query 97231 TCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCT 97290 | |||||||| | || ||||| |||||||| || ||||||||||| ||| Sbjct 1022 TTTACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAACCTGGGCACCATCCGTAGCT 963 Query 97291 CCAATCTGTGCACGGAAATTGTAGAGTAC 97319 ||||||| ||||| || ||| | |||||| Sbjct 962 CCAATCTCTGCACCGAGATTATCGAGTAC 934 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740758811653280