Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20azukicola_20[genbank_20GCA_5F001680625.1_202016-07-06]
32,428 sequences; 51,307,981 total letters
Query= NC_005946.1
Length=105903
Score E
Sequences producing significant alignments: (Bits) Value
seq1954 82.4 5e-11
>seq1954
Length=6437
Score = 82.4 bits (90), Expect = 5e-11
Identities = 130/180 (72%), Gaps = 6/180 (3%)
Strand=Plus/Minus
Query 71419 GTCATCCTGGAGGGAAAGGCGTGGGGGTTGATGATGAGGTCGGGCACCACCCCGTCCTTG 71478
||||| | || |||| |||||||||||| ||||| | ||| || ||| || ||| ||
Sbjct 5058 GTCATTCGCGACGGAATGGCGTGGGGGTTAATGATAATGTCCGGTGTCACACCCTCCCTG 4999
Query 71479 TCGAAGGGCATGTCCTCCTG--GGTCAGGACAGCTCCGCATGTCCCCTTTTGCGCCGTGA 71536
||||||||| |||||||| ||| | | || | || || ||||| || ||||||
Sbjct 4998 CTGAAGGGCATATCCTCCTGACGGT-ACGTCA-CACCAATGGTACCCTTCTG-TCCGTGA 4942
Query 71537 -ATGACGCAAACTTGTCGCCCATCTCTGGGTGCCTGGGGGTCCTCAGCCTCACCTTGACG 71595
|| |||||||||||||| |||| || | ||| ||||||| | |||||||||
Sbjct 4941 CGAGAGGCAAACTTGTCGCCAATCTGGGGAATCTTGGTCGTCCTCACACGGACCTTGACG 4882
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338630914646112
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |