Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20azukicola_20[genbank_20GCA_5F001680625.1_202016-07-06] 32,428 sequences; 51,307,981 total letters Query= NC_005946.1 Length=105903 Score E Sequences producing significant alignments: (Bits) Value seq1954 82.4 5e-11 >seq1954 Length=6437 Score = 82.4 bits (90), Expect = 5e-11 Identities = 130/180 (72%), Gaps = 6/180 (3%) Strand=Plus/Minus Query 71419 GTCATCCTGGAGGGAAAGGCGTGGGGGTTGATGATGAGGTCGGGCACCACCCCGTCCTTG 71478 ||||| | || |||| |||||||||||| ||||| | ||| || ||| || ||| || Sbjct 5058 GTCATTCGCGACGGAATGGCGTGGGGGTTAATGATAATGTCCGGTGTCACACCCTCCCTG 4999 Query 71479 TCGAAGGGCATGTCCTCCTG--GGTCAGGACAGCTCCGCATGTCCCCTTTTGCGCCGTGA 71536 ||||||||| |||||||| ||| | | || | || || ||||| || |||||| Sbjct 4998 CTGAAGGGCATATCCTCCTGACGGT-ACGTCA-CACCAATGGTACCCTTCTG-TCCGTGA 4942 Query 71537 -ATGACGCAAACTTGTCGCCCATCTCTGGGTGCCTGGGGGTCCTCAGCCTCACCTTGACG 71595 || |||||||||||||| |||| || | ||| ||||||| | ||||||||| Sbjct 4941 CGAGAGGCAAACTTGTCGCCAATCTGGGGAATCTTGGTCGTCCTCACACGGACCTTGACG 4882 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338630914646112