Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20azukicola_20[genbank_20GCA_5F001680625.1_202016-07-06] 32,428 sequences; 51,307,981 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq10721 145 2e-29 seq4461 125 1e-23 seq4726 114 3e-20 seq11218 113 9e-20 >seq10721 Length=1928 Score = 145 bits (160), Expect = 2e-29 Identities = 429/657 (65%), Gaps = 7/657 (1%) Strand=Plus/Plus Query 279706 TGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTGCCGATG 279765 |||| ||||||||||||||||||||||| || | || ||||| || | |||||| |||| Sbjct 608 TGTCTGGTGGTTGGAAGATGAAGCTGGCTCTAGCCCGAGCCATGCTTCAGCGTGCTGATG 667 Query 279766 TCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGCTAGTGT 279825 |||| || || || || || |||||||| | || ||||| | || ||||| | | Sbjct 668 TCCTTCTCCTGGACGAACCTACCAACCATCTTGATGTTGCCAACATTGCGTGGCTCGAGA 727 Query 279826 CCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCTGGCTTCC 279885 |||||| | | || || | | || ||||| ||||||||||||||||||| Sbjct 728 ACTACCTCAAGACTCATCCCGATATCACCAGTCTGATTGTTTCTCACGACTCTGGCTTCC 787 Query 279886 TAGATGCCGTGTGCTCTGCCATCATTCACTATGAGCAAAATCTGAAGCTCTCCAAGCACA 279945 | || ||| | | | |||| ||||| |||| || |||||| | ||| Sbjct 788 TCGACAACGTCACCACCGACATCTACCACTACGAGCCCAACAAGAAGCTGGCTTGCTACA 847 Query 279946 TCGGCAACCTGTCTGCTTTCGTGGCAAAGCGCCCTGAGGCGGCCGCCTACTATGACCTGA 280005 ||||||||| | || || || | | ||||| ||||| |||||| ||| Sbjct 848 AGGGCAACCTGGCCGCCTTTGTCGAGATCCGCCCCGAGGCCAAGAGCTACTACACTCTGT 907 Query 280006 AGGACGCCACCGCCAAGTGGGAATTCCCTGAGCCAGGGTTTCTGGAGGGCATCACATCAA 280065 || | ||| || | ||| | |||||| || || | ||| ||| ||| || | Sbjct 908 CGGCCTCCAACGTCCAGTTCAAGTTCCCTCCCCCCGGTATCCTGACTGGCGTCAAGTCCA 967 Query 280066 AGGATCGCGCAATCAT--GAAGCTCCGTGGCGTCTCCTTTGCTTATCCCAATGGCCCCAA 280123 | || || ||||| | | ||| | |||| | | || ||||| | ||||| Sbjct 968 TGACCCGTGCCATCATCCGCATGTCCAACGTGTCT--TACACGTACCCCAAGGCTCCCAA 1025 Query 280124 -CATCTTCAGCAGT--GTCAACTCGCAGGTTTCTATGAACTCACGGATTGGTGTCATTGG 280180 | | || ||| ||| | ||| | | || || || ||| ||||||| Sbjct 1026 GCCTTCTCTGCATGAGGTCTCTTGCCAGCTGACACTGTCGTCCCGTGTTGCCATCATTGG 1085 Query 280181 ACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCCAGGCCAC 280240 ||||| || || || ||||||||||| ||||| | || || ||||||||| | || Sbjct 1086 CCCCAACGGAGCTGGCAAGTCTACCCTGATCAAGTTGCTCACCGGCGAGACCATTCCTAC 1145 Query 280241 TGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGCACGCTTT 280300 | || || |||||| |||||| |||| || | ||| || ||||||||| | Sbjct 1146 TACCGGAAAGGTCGAGAAGCACCCCAACTTGCGTATCGGCTACATCAAGCAGCACGCTCT 1205 Query 280301 CCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGCGCTA 280357 | ||| |||||| || || || | ||| || ||||| ||| |||||||||| || Sbjct 1206 GGAGCACGTCGAGATGCATCTCGAGAAGACCCCCAACCAGTACCTTCAGTGGCGTTA 1262 >seq4461 Length=4022 Score = 125 bits (138), Expect = 1e-23 Identities = 383/586 (65%), Gaps = 17/586 (3%) Strand=Plus/Plus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | |||||| | || ||||| ||||||||||||||||||||| ||| Sbjct 1242 TCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTG 1301 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 || ||||| ||| | ||| || || |||| || |||||| || || ||||| | Sbjct 1302 GCCTTGTAGACCTTCTCGTTGCCGAGGGCGACGAGGAGGCGGTCGGCGACGAACTCGATG 1361 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 ||| | ||| || || | ||||||||| | || || || | ||||| | | Sbjct 1362 TACCGCTTCATGAGGTCGGCGTTCATGCCGAGCAGGGCGCAGGGGAGGGCCTCGGTCAGG 1421 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCT---TCACCTG-TGCCAGAGA 251798 || |||| || ||| || || || | || ||| | ||||| | | | | Sbjct 1422 AACTCCTGCTCAATGGTGACGGCATCGGTGATGATGTCCTGGATGACCTGCTTGCTGGCA 1481 Query 251799 CAGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTC 251858 | || || || | |||| ||||| |||| | ||| ||||||||||| Sbjct 1482 CGGC----CCTTGAGGTGGGAGTGGAGGAGGCATGCAAAGTCGGTGTGAAGACCCTCGTC 1537 Query 251859 GCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCA 251918 ||| ||||| ||||||||| | |||||||||||| | ||||| ||| ||||||| Sbjct 1538 ACGAGAGATGAGCTCGTTGGAAAAGGTCAGGCCAGGCATGAGGCCACGCTTCTTGAGCCA 1597 Query 251919 GAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACAAG 251978 |||||| | | ||||| || ||| | | |||||| || | | || || || Sbjct 1598 GAAGATGGAGGCAAAGGCACCGCTGAAGAAGATACCCTCAACGGCAGCAAAGGCGACGAG 1657 Query 251979 GCGCTCAGCAAACGA------CTTGTCCTGCGACAAGAACTTCTGTGCCCATGCTGCCTT 252032 |||| |||||| || ||||||||| || | | || ||||| | ||||| Sbjct 1658 ACGCTGAGCAAAGGACGAGTTCTTGTCCTG-GA-TCCATCGGATG-GCCCAGTCGGCCTT 1714 Query 252033 CTTTCCAACCGCGGGGATTGTTTCGATTGCATCAAAGAGAGAGTTCCGCTCGGCATCGTC 252092 ||| | | |||||| || || || || | ||||| || | || | ||| || Sbjct 1715 CTTGCGGATGCAGGGGATGGTCTCAATGGCGTTGAAGAGGTAGGTTCGTTGAGCAGGCTC 1774 Query 252093 CTCGATGAGCGCATCAAGCAGGAGAGAGTACATCTCCGAATGGATG 252138 || |||| | |||| ||||| ||||| |||| || |||||| Sbjct 1775 CTTGATGTAGGTGTCAATGAGGAGCGAGTAGGTCTCGGAGTGGATG 1820 >seq4726 Length=3045 Score = 114 bits (126), Expect = 3e-20 Identities = 166/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 280160 CTCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCT 280219 ||| || |||| ||||| || ||||| ||||| || ||||| ||||| ||||| ||||| Sbjct 2670 CTCCCGTATTGCCGTCATCGGTCCCAACGGTGCCGGAAAGTCCACCCTCATCAACGTCCT 2611 Query 280220 GACTGGCGAGACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGC 280279 ||||| ||| | |||| ||||| | | |||| ||||| || || || Sbjct 2610 CACTGGTGAGCTCATCCCCACCGAGGGTGAGATCTACCAGCACGAGAACATCCGTATCGC 2551 Query 280280 TTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCA 280339 ||| || |||||||||||| |||||||| ||||||||||||| ||| ||| | | Sbjct 2550 CTACATCAAGCAGCACGCTTTCGCTCACATCGATAACCACCTGGACAAGACCCCTTCCGA 2491 Query 280340 ATACATTCAGTGGCGCTATGCA-AGTGGGCAGGATCTGGAGTCGGTGGATCG 280390 ||||| |||||||| | | || | ||| |||||| ||| | |||| || Sbjct 2490 GTACATCCAGTGGCGAT-TCCAGACTGGTGAGGATCGTGAGACCATGGACCG 2440 >seq11218 Length=1917 Score = 113 bits (124), Expect = 9e-20 Identities = 177/251 (71%), Gaps = 2/251 (1%) Strand=Plus/Minus Query 279316 AGGACGAAGCAGAGAAGGAGACTGAGCCAGGTGAGGATCTGTGTGACTGTGATTTCTCGC 279375 ||| ||| || ||| |||| ||| ||||||||||| || ||||| |||||| | Sbjct 563 AGGCCGAGGCCGAGGAGGATGAGGAGGAGGGTGAGGATCTTTGCAACTGTACTTTCTCTC 504 Query 279376 TCGCATATGGTGGGAAGATTCTGCTAAACTCTACCCGCCTCAACATCAAGCGTGGCAACC 279435 | || || |||| ||||||||||| ||| || | |||| | ||||||||||| | | Sbjct 503 TTGCCTACGGTGCCAAGATTCTGCTCAACCAGACTCACCTCCGCCTCAAGCGTGGCCAGC 444 Query 279436 GGTATGGTCTCATCGGTCCCAATGGAGCGGGTAAGAGCACTCTAATGCGCGCCATTGCAA 279495 | || ||||| ||||||||| || | || ||| |||||| ||||| ||||| | Sbjct 443 GCTACGGTCTTTGCGGTCCCAACGGTTCCGGCAAGTCCACTCTCATGCGTGCCATCAACA 384 Query 279496 ACGGTCAGCTGGAAGGATTTCCTAACGCA-TCTGAGGTAAGGACAGTGTATGTAGAGCAC 279554 ||| ||| | | ||| ||||| | ||| ||||| | || || | || |||||| Sbjct 383 ACGAGCAGGTTG-AGGGTTTCCCCAAGCAGAGCGAGGTCAAAACCGTCTTCGTCGAGCAC 325 Query 279555 GACATCGACTC 279565 ||| | ||||| Sbjct 324 GACCTGGACTC 314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027409750511948