Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20azukicola_20[genbank_20GCA_5F001680625.1_202016-07-06] 32,428 sequences; 51,307,981 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq4461 167 4e-36 seq1209 161 2e-34 seq10759 145 1e-29 seq4726 122 2e-22 seq10721 107 4e-18 seq11218 87.8 3e-12 >seq4461 Length=4022 Score = 167 bits (184), Expect = 4e-36 Identities = 560/864 (65%), Gaps = 21/864 (2%) Strand=Plus/Plus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 || ||| || ||||||||||| || || || |||||||||||||| |||||| | Sbjct 1205 CAGGACACCAGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACC 1264 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054 |||||| ||| |||||||||||| |||||||| ||| | ||| || || Sbjct 1265 GAGGGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCCTTGTAGACCTTCTCGTTGCC 1324 Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114 ||| || || | |||||| || ||||||||||||||| | |||| ||||| | ||| Sbjct 1325 GAGGGCGACGAGGAGGCGGTCGGCGACGAACTCGATGTACCGCTTCATGAGGTCGGCGTT 1384 Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGC 10174 |||||| | || | |||||||| ||| ||| | ||| |||| || ||| ||| || Sbjct 1385 CATGCCGAGCAGGGCGCAGGGGAGGGCCTCGGTCAGGAACTCCTGCTCAATGGTGACGGC 1444 Query 10175 TTCCTCGACGATGCTCT---TTACC-ACGTCAAGGGACAGCTTGTTCTCGAGCTTCGAAT 10230 || || |||| || | ||| | | || || || || ||| | || | Sbjct 1445 ATCGGTGATGATGTCCTGGATGACCTGCTTGCTGGCACGGC----CCTTGAGGTGGGAGT 1500 Query 10231 ACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACA 10290 ||||| | |||| | ||| || |||||||| || ||||| ||||||||| | Sbjct 1501 GGAGGAGGCATGCAAAGTCGGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAA 1560 Query 10291 AACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGG 10350 | ||| || |||||||| || || || |||||||| |||| | || | ||| Sbjct 1561 AGGTCAGGCCAGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGC 1620 Query 10351 AGAACAGAAGACCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGAAGGA-GCGGTC- 10408 ||| | | |||||| ||| | |||||||||| |||| || ||||| | | || Sbjct 1621 TGAAGAAGATACCCTCAACGGCAGCAAAGGCGACGAGACGCTGAGCAAAGGACGAGTTCT 1680 Query 10409 -GCGCGAAAAGTATTTCGAGGCCCACGCTGCCTTCTTTCCCACGGCAGGGATCGTCTCGA 10467 | | | || |||||| | |||||||| | | | ||||| ||||| | Sbjct 1681 TGTCCTGGATCCATCGGATGGCCCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTCTCAA 1740 Query 10468 TAGCCTCGAAGAGCTTGTTACGCTCGGTCTCGTCCTCAATAAGAGCATCAAGGAGCAGGG 10527 | || | |||||| | | | || | | |||| || | |||| ||| || | Sbjct 1741 TGGCGTTGAAGAGGTAGGTTCGTTGAGCAGGCTCCTTGATGTAGGTGTCAATGAGGAGCG 1800 Query 10528 AGTATTGCTCGCTGTGGACGCTCTCATTGTACCCCTGGTAAGCGTAGAA-CATACGTGCC 10586 |||| |||| ||||| | |||| | |||| | ||||||| ||| || ||| Sbjct 1801 AGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAT-CGGGCC 1859 Query 10587 GAGGGGTCCGTGACTTCCTCGGCAAAGTTGTTGTTCAGGTTCTCCATCACCATGCCATCG 10646 |||| | ||| || || || | | |||||||| | || ||||| || Sbjct 1860 TCGGGGATCTGGACCTCGCCGCTGAATCGCTCGACAAGGTTCTCGTTGACGATGCCGTCA 1919 Query 10647 CTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAAGTGGCGCTCATCATCGTTCA----G 10702 | | || |||||| |||||||||| || |||| |||| || | ||| | Sbjct 1920 GAGGCAGCGAAGAAGGCGAGGATGTGGGAGACGAAGAACTGCTCGTCGGCAGTCAGGCGG 1979 Query 10703 TTTTTCACGCCAGTCTACCACATCCTGGTTGAGCTGGACCTCCTCCACGGTCCAGAAAGT 10762 || || |||||| | ||||| | || | | |||||| | |||||||||| Sbjct 1980 TTGTT----CCAGTCGTGGAGATCCTTGGATAGATCAATCTCCTCGGCAGTCCAGAAAGA 2035 Query 10763 GGCAACGGCCTTCTTGTACATCTG 10786 ||| | ||||||||||||||||| Sbjct 2036 GGCCTCAGCCTTCTTGTACATCTG 2059 >seq1209 Length=9026 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | |||| ||| || ||| ||| || |||||||| || ||| Sbjct 5266 CCACCACGCAGGCGGAGGACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 5325 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || || || ||||||| || |||||||| || Sbjct 5326 AGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGTCGCTGCTGGTCGGGGGGG 5385 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| | ||||||| ||||||||||| | || || || Sbjct 5386 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 5445 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||| || || ||||||||||||||||| || |||||||| Sbjct 5446 TCGAGGGTGATTGTCTTCCCCGTGAGGGTCTTGACAAAGATCTGCAT 5492 >seq10759 Length=1737 Score = 145 bits (160), Expect = 1e-29 Identities = 164/220 (75%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| || || | |||| ||| || || ||||| || |||||||| || ||| | Sbjct 1352 CCACCGCGCAGACGAAGAACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTG 1411 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| |||||||| || || | || ||||| || ||| Sbjct 1412 AGAGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCAGGAGGA 1471 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||| ||||| ||||| | ||||||| ||||| ||||| | || || || Sbjct 1472 ATACCCTCCTTATCTTGGATCTTCGACTTGACGTTGTCGATCGTGTCGGAAGACTCCACC 1531 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATA 68454 || | |||||| || || || |||||||||||||||| || Sbjct 1532 TCGAGGGTGATAGTCTTACCAGTGAGGGTCTTGACGACTA 1571 >seq4726 Length=3045 Score = 122 bits (134), Expect = 2e-22 Identities = 343/516 (66%), Gaps = 32/516 (6%) Strand=Plus/Plus Query 224981 CGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCA 225040 |||||||||||||||| | |||||| ||||||||||||| || || || |||||| Sbjct 2476 CGCCACTGGATGTACTCGGAAGGGGTCTTGTCCAGGTGGTTATCGATGTGAGCGAAAGCG 2535 Query 225041 TGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACA-CAGAGCCCCGAGTCGG 225099 ||||| | ||| || || || ||||| |||| | | | | || || || Sbjct 2536 TGCTGCTTGATGTAGGCGATACGGATGTTCTCGTGCTGGTAGATCTCACCCTCGGTGGGG 2595 Query 225100 TTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCAAT 225159 || | ||| || |||||||| |||||||| || | ||| || ||||| ||||| || || Sbjct 2596 ATGAG-CTCACCAGTGAGGACGTTGATGAGGGTGGACTTTCCGGCACCGTTGGGACCGAT 2654 Query 225160 CACGCCAATCCGGGATGACATTGCAACCTG---CGAGTTCACGTTG--CTGAAGATCTCA 225214 ||| |||| ||||| || | ||| ||| | || || |||| | | | Sbjct 2655 GACGGCAATACGGGAGCCCAGGGAGCACTGGAAGGAGATGTCGGTGATCTGAGGCTTGGA 2714 Query 225215 GGGCCAGTTTGGTAAGCAAAGGCCA------CGCCACGCAGCTTCATGATGGCACGGTCC 225268 || | | |||| |||| || | ||||||| |||||| | || Sbjct 2715 GGTACCG--GGGTACTGGAAGGACATCTTGGTGGCACGCAG------GATGGCCTTGGCC 2766 Query 225269 TTGGAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACCGCGTCC 225328 |||| | | ||||| ||||| |||||||| ||||| ||| | || | | | | Sbjct 2767 TTGGTCTTGACTCCCTCGAGGAAACCGGGCTCAGGGAAGGAGAACTCGATCTCGGAGGCA 2826 Query 225329 TTCAGGTCGTAGTAAGAT---GCAGCCTCGGGTCGCTTTGCCACGAAAGCAGACAGGTTT 225385 || |||||||||||| |||| ||| ||| || |||||||||| |||||| Sbjct 2827 CCGAGCTCGTAGTAAGATCGGGCAG--AGGGGACGCGCTG-GACGAAAGCAGCCAGGTTA 2883 Query 225386 CCGAGGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAAT-TGCCGAGCACACTGC 225444 || || | ||||||||| | |||||| || ||||| ||| | ||| || Sbjct 2884 CCCTTGTAGCGCTTGAGCTTGAAG---CGCTCGTAGTGGACAATGTGCTG-GCAGACGTT 2939 Query 225445 GTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGA 225480 ||| |||||||||||||||||||| || |||||||| Sbjct 2940 GTCGAGGAAGCCAGAGTCGTGGGAGACGATGATGGA 2975 >seq10721 Length=1928 Score = 107 bits (118), Expect = 4e-18 Identities = 431/670 (64%), Gaps = 19/670 (3%) Strand=Plus/Minus Query 224978 TACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAA 225037 || |||||||| | |||||||||||||||| | || || || |||| | || | | | Sbjct 1262 TAACGCCACTGAAGGTACTGGTTGGGGGTCTTCTCGAGATGCATCTCGACGTGCTCCAGA 1203 Query 225038 GCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTC 225097 || ||||| | ||| | || |||| |||||| |||||| || || ||| Sbjct 1202 GCGTGCTGCTTGATGTAGCCGATACGCAAGTTGGGGTGCTTCTCGACCTTTCCGGTAGTA 1143 Query 225098 GGTTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCA 225157 || | |||||||||||| | |||||| || |||| |||||| || || ||||||||| Sbjct 1142 GGAATGGTCTCGCCGGTGAGCAACTTGATCAGGGTAGACTTGCCAGCTCCGTTGGGGCCA 1083 Query 225158 ATCACGCCAATCCGGGATGACATTGCAACCTGCGAGTTCACGT--TGCTGA-AGATCTCA 225214 || | | ||| ||||| |||| || | ||| | || | ||| || | || Sbjct 1082 ATGATGGCAACACGGGACGACAGTGTCAGCTGGCAAGAGACCTCATGCAGAGAAGGCTTG 1023 Query 225215 GGGCCAGTTTGGTAAGCAAAGGCCAC----GCCACGCAGCTTCATGATGGCACGGTCCTT 225270 || | | |||| | | | ||| | || || | |||||||||||| | | Sbjct 1022 GGAGCCTTGGGGTACGTGTAAGACACGTTGGACATGCGG----ATGATGGCACGGGTCAT 967 Query 225271 GGAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACCGCGTCCTT 225330 ||| | | || ||||| ||||| ||||||| ||| | | | || Sbjct 966 GGACTTGACGCCAGTCAGGATACCGGGGGGAGGGAACTTGAACTGGACGTTGGAGGCCGA 907 Query 225331 CAGGTCGTAGTAAGATGCAGCCTCGGGTCGCTTTGCCACGAAAGCAGACAGGTTTCCGAG 225390 ||| |||||| |||||||| || | | || || || | |||||| || Sbjct 906 CAGAGTGTAGTAGCTCTTGGCCTCGGGGCGGATCTCGACAAAGGCGGCCAGGTTGCCCTT 847 Query 225391 GTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAATTGCCGAGCACACTGCGTCAAG 225450 || | ||||| ||| |||||| || || | | | || ||| || Sbjct 846 GTAGCAAGCCAGCTTCTTGTTGGGCTCGTAGTGGTAGATGTCGGTGGTGACGTTGTCGAG 787 Query 225451 GAAGCCAGAGTCGTGGGACACAAT--GATGGACGACACGTTCGTCA-GGCCCTTGAGGTG 225507 ||||||||||||||| || ||||| || | || | ||| | | |||||||| Sbjct 786 GAAGCCAGAGTCGTGAGAAACAATCAGACTGGTGATA---TCGGGATGAGTCTTGAGGTA 730 Query 225508 CGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGCAG 225567 | |||||| || | |||| || || | ||||| |||||||||||||| || || Sbjct 729 GTTCTCGAGCCACGCAATGTTGGCAACATCAAGATGGTTGGTAGGTTCGTCCAGGAGAAG 670 Query 225568 GATGTCAGCATCAATG-AGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCCGG 225626 || |||||| | || || ||||| || | |||| ||||||||| ||||| || || | Sbjct 669 GACATCAGCA-CGCTGAAGCATGGCTCGGGCTAGAGCCAGCTTCATCTTCCAACCACCAG 611 Query 225627 ACAGGGAGCC 225636 ||| |||||| Sbjct 610 ACAAGGAGCC 601 >seq11218 Length=1917 Score = 87.8 bits (96), Expect = 3e-12 Identities = 169/247 (68%), Gaps = 2/247 (1%) Strand=Plus/Plus Query 225751 GGTCATGTCCGAGACAGACGCGTCAATGTCGTGGTCCACGTACACCGTCCGGAGCT-GAG 225809 |||||| || | | ||| | ||| | |||||| || ||| | || || || || | Sbjct 295 GGTCATCTCAGTGTCAGCAGAGTCCAGGTCGTGCTCGACGAAGACGGTTTTGACCTCGCT 354 Query 225810 AAGCATCGGGGAAGCCCTCCAGCTGGCCATTTGCAATCGCACGGAGCAGGGTACTCTTGC 225869 || | |||||| ||||| | ||| | || || ||||| | || || ||||| Sbjct 355 CTGCTT-GGGGAAACCCTCAACCTGCTCGTTGTTGATGGCACGCATGAGAGTGGACTTGC 413 Query 225870 CCGCGCCGTTGGGACCGATGAGGCCGTAATGATTCCCGCGCTTGATGTTGAGGCGCGTGG 225929 | | |||||||||||| || ||||| | | || ||||||| | |||| | || Sbjct 414 CGGAACCGTTGGGACCGCAAAGACCGTAGCGCTGGCCACGCTTGAGGCGGAGGTGAGTCT 473 Query 225930 AGTTCAGGAGGATCTTGCCACCATAGGCAAGGGAGAACTCGCAATCGCACAGGTCCTCAC 225989 ||| || || |||||| |||| |||||||| ||||| || | ||| || ||||||| Sbjct 474 GGTTGAGCAGAATCTTGGCACCGTAGGCAAGAGAGAAAGTACAGTTGCAAAGATCCTCAC 533 Query 225990 CCTCCTC 225996 ||||||| Sbjct 534 CCTCCTC 540 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921248820360160