Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20azukicola_20[genbank_20GCA_5F001680625.1_202016-07-06] 32,428 sequences; 51,307,981 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq4461 122 2e-22 seq11218 84.2 5e-11 >seq4461 Length=4022 Score = 122 bits (134), Expect = 2e-22 Identities = 306/457 (67%), Gaps = 10/457 (2%) Strand=Plus/Minus Query 243286 TCATTTGCTGAGCGTCTCGTCGCCTGGGTGTGCGTTGAAGGTATTCTGTTTTCCG-GGAG 243344 || |||||| ||||||||||||||| | |||||| ||||| || | ||| | || | Sbjct 1672 TCCTTTGCTCAGCGTCTCGTCGCCTTTGCTGCCGTTGAGGGTAT-CT-TCTTCAGCGGTG 1615 Query 243345 TTTCTGCG-CCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTA 243403 | ||| ||||||| ||||| ||| || | ||||||||||| | || | Sbjct 1614 CCTTTGCCTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGCCTGACCTTTTCCA 1555 Query 243404 ACGAGTTCATCAGTCGCGACGAGGGCCTTCACCAACAGTTCGGTGAGCTTATGTATTCAA 243463 ||||| ||||| ||| |||||||| |||||| | || | || | | || Sbjct 1554 ACGAGCTCATCTCTCGTGACGAGGGTCTTCACACCGACTTTGCATGCCTCCTCCACTCCC 1495 Query 243464 AGCTCCAGAACAAGCTACCATTCGAAACGGTCAAACAA---ATCATCACAGAAGCAGTTG 243520 | ||| || | | ||| | | ||||| || |||||||| || || || Sbjct 1494 ACCTCAAGGGCCG--TGCCAG-CAAGCAGGTCATCCAGGACATCATCACCGATGCCGTCA 1438 Query 243521 AAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTG 243580 | || |||| ||| | ||| || | || ||| || | ||||||||| | | Sbjct 1437 CCATTGAGCAGGAGTTCCTGACCGAGGCCCTCCCCTGCGCCCTGCTCGGCATGAACGCCG 1378 Query 243581 AACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATG 243640 | |||||| | ||||||||| ||||| ||||||||| | || |||| || || | | Sbjct 1377 ACCTCATGAAGCGGTACATCGAGTTCGTCGCCGACCGCCTCCTCGTCGCCCTCGGCAACG 1318 Query 243641 AGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGA 243700 |||| || ||||| ||| |||||||| | ||| |||||| ||| || || || | Sbjct 1317 AGAAGGTCTACAAGGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGTGGCA 1258 Query 243701 AAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA 243737 | || ||||||||||| ||||||||| |||| || || Sbjct 1257 AGACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCA 1221 >seq11218 Length=1917 Score = 84.2 bits (92), Expect = 5e-11 Identities = 123/174 (71%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 334181 GGGGAACCCTTCAAGCTGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCC 334240 |||||| || |||| ||| |||| || || ||||| ||||| || || || | || Sbjct 361 GGGGAAACCCTCAACCTGCTCGTTGTTGATGGCACGCATGAGAGTGGACTTGCCGGAACC 420 Query 334241 GTTTGGCCCACACAGACCGTAGCGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAG 334300 ||| || || || ||||||||||| | |||||||| || || | || | ||| || Sbjct 421 GTTGGGACCGCAAAGACCGTAGCGCTGGCCACGCTTGAGGCGGAGGTGAGTCTGGTTGAG 480 Query 334301 AAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 334354 ||||| || |||| || || ||||| || ||| | || ||||||||||| Sbjct 481 CAGAATCTTGGCACCGTAGGCAAGAGAGAAAGTACAGTTGCAAAGATCCTCACC 534 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102421771281800