Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20azukicola_20[genbank_20GCA_5F001680625.1_202016-07-06] 32,428 sequences; 51,307,981 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq1209 131 2e-25 seq10759 125 8e-24 seq10395 93.3 5e-14 >seq1209 Length=9026 Score = 131 bits (144), Expect = 2e-25 Identities = 151/201 (75%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 42012 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 42071 ||||||||||| || || ||||| || ||| || || | || || |||||||| ||| Sbjct 5296 GTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCA 5355 Query 42072 GCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTG 42131 || || ||||||||||||||||||| || | || |||||||||| ||| || ||| Sbjct 5356 GCAAAGATGAGTCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTG 5415 Query 42132 AGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGT 42190 | ||| | | | |||||| || ||||| |||| ||||| || || ||||| || || Sbjct 5416 A-CGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATTGTCTTCCCCGTGAGGGT 5474 Query 42191 CTTTACAAAGATTTGCATTTT 42211 ||| |||||||| ||||| || Sbjct 5475 CTTGACAAAGATCTGCATCTT 5495 >seq10759 Length=1737 Score = 125 bits (138), Expect = 8e-24 Identities = 145/193 (75%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || | ||| || || |||| || |||||||||||||| || Sbjct 1159 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCGTCTTCCAGCTGCTTACCAGCAAA 1218 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || |||||||||||||| | || | || |||||||||| ||| | || | | ||| Sbjct 1219 GATAAGTCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC-TGAATCTTGGACTTCACGT 1277 Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | || |||||||| ||||| || | |||||||| || || || || ||||| | Sbjct 1278 TGTCAATGGTATCGCTCGACTCCACCTCTAGAGTGATGGTCTTTCCAGTGAGAGTCTTGA 1337 Query 42196 CAAAGATTTGCAT 42208 ||||||| ||||| Sbjct 1338 CAAAGATCTGCAT 1350 >seq10395 Length=1652 Score = 93.3 bits (102), Expect = 5e-14 Identities = 129/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 42019 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 42078 |||| || || ||||| || | || || || | || || |||||||| |||||||| | Sbjct 353 CCTTCTGGATGTTGTAGTCGGAAAGGGTTCGGCCATCCTCCAGCTGCTTGCCAGCGAAGA 294 Query 42079 TGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 42138 | |||||||||||||| | || | || |||||||||| ||| || |||| | Sbjct 293 TCAGTCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 234 Query 42139 CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAA 42198 | | ||||| || || || |||| |||||||| |||||||| || ||||| || | Sbjct 233 CAATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA 174 Query 42199 A 42199 | Sbjct 173 A 173 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 542992608691520